RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ONECUT1Q9UBC0 465 aa15.9■□□□□ 0.14
PNKP-207ENST00000596014 FAM90A10PA6NDY2 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A18PA6NE21 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A16PA6NEW6 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A20PA6NIJ5 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A8PA6NJQ4 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A7PA6NKC0 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A22PA8MWA6 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A12PA8MX19 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A5PA8MXJ8 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A23PA8MXZ1 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A15PP0C7V4 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A13PP0C7W8 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A14PP0C7W9 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 FAM90A24PP0C7X0 464 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 SLC2A2P11168 524 aaPredicted RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 MMP9P14780 707 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 ELK1P19419 428 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 RPS27AP62979 156 aaKnown RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 MADCAM1Q13477 382 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 ATAD3CQ5T2N8 411 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 METTL11BQ5VVY1 283 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 UPRTQ96BW1 309 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 POM121Q96HA1 1249 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 PCGF1Q9BSM1 259 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 DPCDQ9BVM2 203 aaPredicted RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 SIRPDQ9H106 197 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 EXTL2Q9UBQ6 330 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 KPTNQ9Y664 436 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 TOX4O94842 621 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 APOA1P02647 267 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 EIF4EP06730 217 aaKnown RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 P2RX3P56373 397 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 MEF2CQ06413 473 aaPredicted RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 IL18Q14116 193 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 ATXN7L3Q14CW9 347 aaPredicted RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 CMTM4Q8IZR5 234 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 TEX29Q8N6K0 151 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 NANPQ8TBE9 248 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 COQ2Q96H96 371 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 TM2D1Q9BX74 207 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 LIN7BQ9HAP6 207 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 SPACA1Q9HBV2 294 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 RCC2Q9P258 522 aaKnown RBP15.89■□□□□ 0.13
PNKP-207ENST00000596014 FBLN5Q9UBX5 448 aa15.89■□□□□ 0.13
PNKP-207ENST00000596014 MEX3AA1L020 520 aaKnown RBP15.88■□□□□ 0.13
PNKP-207ENST00000596014 LDLRAD4O15165 306 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 SRP14P37108 136 aaKnown RBP15.88■□□□□ 0.13
PNKP-207ENST00000596014 GLIPR1P48060 266 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 KCNJ3P48549 501 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 ZNF273Q14593 569 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 KRBOX4Q5JUW0 171 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 SIGIRRQ6IA17 410 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 BRICD5Q6PL45 260 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 C1orf122Q6ZSJ8 110 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 KIR3DL3Q8N743 410 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 Q8N7P7 452 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 SAMD12Q8N8I0 201 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 TBX15Q96SF7 602 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 ING3Q9NXR8 418 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 ABRACLQ9P1F3 81 aa15.88■□□□□ 0.13
PNKP-207ENST00000596014 JMJD1CQ15652 2540 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 A0A0B4J203 849 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 A0A1W2PPH5 198 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 hADV38S2A0JD32 116 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 HLA-DQB1P01920 261 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 ASAH1Q13510 395 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 KLF17Q5JT82 389 aaPredicted RBP15.87■□□□□ 0.13
PNKP-207ENST00000596014 RAB12Q6IQ22 244 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 LPAR5Q9H1C0 372 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 CUBNO60494 3623 aa15.87■□□□□ 0.13
PNKP-207ENST00000596014 TMEM272A0A1B0GTI8 110 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 H3BUI4 141 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 M0R1W7 72 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 FSHBP01225 129 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 CCL3L1P16619 93 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 SRD5A1P18405 259 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 FUT3P21217 361 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 TALDO1P37837 337 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 TCF23Q7RTU1 214 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 PLPPR1Q8TBJ4 325 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 NICN1Q9BSH3 213 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 URM1Q9BTM9 101 aaKnown RBP15.86■□□□□ 0.13
PNKP-207ENST00000596014 ODAMA1E959 279 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 MCRIP1C9JLW8 97 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 PAX5Q02548 391 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 PLA2G7Q13093 441 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 RSBN1Q5VWQ0 802 aaPredicted RBP15.86■□□□□ 0.13
PNKP-207ENST00000596014 TRIQKQ629K1 86 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 CCBE1Q6UXH8 406 aaPredicted RBP15.86■□□□□ 0.13
PNKP-207ENST00000596014 VMO1Q7Z5L0 202 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 FAM89BQ8N5H3 189 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 C11orf42Q8N5U0 333 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 RAB22AQ9UL26 194 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 LINC00312Q9Y6C7 94 aa15.86■□□□□ 0.13
PNKP-207ENST00000596014 A0A0A6YYD4 124 aa15.85■□□□□ 0.13
PNKP-207ENST00000596014 PDCD6O75340 191 aa15.85■□□□□ 0.13
PNKP-207ENST00000596014 PAHP00439 452 aa15.85■□□□□ 0.13
PNKP-207ENST00000596014 HNRNPCP07910 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
PNKP-207ENST00000596014 FAM157CP0CG43 387 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms