RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	SMPD3	Q9NY59	655 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	ZNF581	Q9P0T4	197 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	PSG11	Q9UQ72	335 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	ST3GAL6	Q9Y274	331 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	NPIPB11	E5RHQ5	1161 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815		M0QZK8	103 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	CD33	P20138	364 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	KCNJ3	P48549	501 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	PPP3R1	P63098	170 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	C10orf99	Q6UWK7	81 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	THNSL2	Q86YJ6	484 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	DRAM1	Q8N682	238 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	SUMF2	Q8NBJ7	301 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	WFDC9	Q8NEX5	89 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	ORAI1	Q96D31	301 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	DPCD	Q9BVM2	203 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	METTL9	Q9H1A3	318 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	TMEM138	Q9NPI0	162 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	PCDHB16	Q9NRJ7	776 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	NECAP2	Q9NVZ3	263 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	BABAM2	Q9NXR7	383 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	ZNF281	Q9Y2X9	895 aa		12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A18P	A6NE21	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A16P	A6NEW6	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A20P	A6NIJ5	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A9P	A6NNJ1	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A12P	A8MX19	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A5P	A8MXJ8	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	EBAG9	O00559	213 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	OGG1	O15527	345 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	CLIC3	O95833	236 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	CSTB	P04080	98 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	SNRNP70	P08621	437 aa	Known RBP	12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A15P	P0C7V4	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A13P	P0C7W8	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A14P	P0C7W9	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM90A24P	P0C7X0	464 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	IGLL1	P15814	213 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	ZNF93	P35789	620 aa	Predicted RBP	12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	GNG10	P50151	68 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	MADCAM1	Q13477	382 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	DIAPH2-AS1	Q14236	149 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	HES1	Q14469	280 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	HNF4G	Q14541	408 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	DDI2	Q5TDH0	399 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	OSR2	Q8N2R0	312 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR4X2	Q8NGF9	303 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR52N1	Q8NH53	320 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR56B4	Q8NH76	319 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	MRAP	Q8TCY5	172 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	PHF21A	Q96BD5	680 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	S100A13	Q99584	98 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815	CLEC2D	Q9UHP7	191 aa		12.79	□□□□□ -0.36
CIRBP-240	ENST00000592815		A0A1W2PPE3	182 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	IRGM	A1A4Y4	181 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	PIN1P1	O15428	100 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR7C1	O76099	320 aa	Predicted RBP	12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	MYL12A	P19105	171 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	GZMH	P20718	246 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	BDKRB2	P30411	391 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	SSTR5	P35346	364 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	LOXL3	P58215	753 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	PAX5	Q02548	391 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	KHDC1L	Q5JSQ8	128 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	SLC16A12	Q6ZSM3	486 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR10A7	Q8NGE5	316 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR13C5	Q8NGS8	318 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR10X1	Q8NGY0	326 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	GHSR	Q92847	366 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	RDH12	Q96NR8	316 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	IL36G	Q9NZH8	169 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	DIMT1	Q9UNQ2	313 aa	Known RBP	12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	MOB4	Q9Y3A3	225 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815	HSPE1-MOB4	S4R3N1	261 aa		12.78	□□□□□ -0.36
CIRBP-240	ENST00000592815		A0A1W2PPI3	338 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	GEMIN2	O14893	280 aa	Known RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	LALBA	P00709	142 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	PF4	P02776	101 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	SERPINA2	P20848	420 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	RAB7A	P51149	207 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	RBM11	P57052	281 aa	Known RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	LRRC36	Q1X8D7	754 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	SLC22A6	Q4U2R8	563 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	NHLRC3	Q5JS37	347 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	ATAD3C	Q5T2N8	411 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	FOXB2	Q5VYV0	432 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	CCDC107	Q8WV48	283 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	CYGB	Q8WWM9	190 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	SMIM19	Q96E16	107 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	TMEM80	Q96HE8	168 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	IFT22	Q9H7X7	185 aa		12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	CHCHD3	Q9NX63	227 aa	Known RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.77	□□□□□ -0.37
CIRBP-240	ENST00000592815	TMEM30CP	A0ZSE6	113 aa		12.76	□□□□□ -0.37
CIRBP-240	ENST00000592815	TMEM11	P17152	192 aa		12.76	□□□□□ -0.37

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