RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PPIL3Q9H2H8 161 aaKnown RBP9.07□□□□□ -0.96
SMAD4-211ENST00000590499 NCOR1P1Q9H4R4 102 aa9.07□□□□□ -0.96
SMAD4-211ENST00000590499 TAS2R3Q9NYW6 316 aa9.07□□□□□ -0.96
SMAD4-211ENST00000590499 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
SMAD4-211ENST00000590499 TBL2Q9Y4P3 447 aaKnown RBP9.07□□□□□ -0.96
SMAD4-211ENST00000590499 TRGV10A0A0A0MS01 117 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 IGHV2-26A0A0B4J1V2 119 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 A0A1B0GUS0 222 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 A0A1W2PP11 408 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 FUOMA2VDF0 154 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 VGLL3A8MV65 326 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 H3BUX3 64 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 ZNF780AO75290 641 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-211ENST00000590499 SC5DO75845 299 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 HTR3BO95264 441 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 ARG1P05089 322 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 CRYBA1P05813 215 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 CGB3P0DN86 165 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 CGB7P0DN87 165 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 GDNFP39905 211 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 GPR50Q13585 617 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 LRRC75BQ2VPJ9 315 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 PAN3Q58A45 887 aaKnown RBP9.06□□□□□ -0.96
SMAD4-211ENST00000590499 KRBOX4Q5JUW0 171 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 RSBN1Q5VWQ0 802 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-211ENST00000590499 BAIAP2L2Q6UXY1 529 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 HEPN1Q6WQI6 88 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 GDPGP1Q6ZNW5 385 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 CDH26Q8IXH8 852 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 OSR2Q8N2R0 312 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 MS4A15Q8N5U1 240 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 OR4F5Q8NH21 305 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 NR1H4Q96RI1 486 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-211ENST00000590499 SSX3Q99909 188 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 TMEM133Q9H2Q1 129 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 GAL3ST2Q9H3Q3 398 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 ING4Q9UNL4 249 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 ST3GAL6Q9Y274 331 aa9.06□□□□□ -0.96
SMAD4-211ENST00000590499 A0A087X0M5 115 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 A0A1B0GX30 115 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 BTBD17A6NE02 478 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 HSPB6O14558 160 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 GEMIN2O14893 280 aaKnown RBP9.05□□□□□ -0.96
SMAD4-211ENST00000590499 RGS10O43665 173 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 SERPINA2P20848 420 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 CDK2P24941 298 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MAPK3P27361 379 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-211ENST00000590499 CD34P28906 385 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 KCNJ3P48549 501 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 LGALS4P56470 323 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 TPBGQ13641 420 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MED22Q15528 200 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MLANAQ16655 118 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 C17orf58Q2M2W7 97 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MPV17LQ2QL34 196 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 SLC22A6Q4U2R8 563 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 ACSM3Q53FZ2 586 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 FAM27D1Q5T7N8 215 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 Q6ZSV7 163 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 PRSS48Q7RTY5 328 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 TRAPPC6BQ86SZ2 158 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 LINC00596Q86U02 117 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 JAGN1Q8N5M9 183 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 NKAIN3Q8N8D7 197 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 OR4D6Q8NGJ1 314 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 OR4P4Q8NGL7 312 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 PLPPR1Q8TBJ4 325 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MUL1Q969V5 352 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 FOXRED1Q96CU9 486 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MALSU1Q96EH3 234 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 CLEC7AQ9BXN2 247 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 SLITRK2Q9H156 845 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 BEX1Q9HBH7 125 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 RAB26Q9ULW5 256 aa9.05□□□□□ -0.96
SMAD4-211ENST00000590499 MRPS28Q9Y2Q9 187 aaKnown RBP9.05□□□□□ -0.96
SMAD4-211ENST00000590499 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 ZNF729A6NN14 1252 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 TSPAN9O75954 239 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 IGLV1-47P01700 117 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 CSTBP04080 98 aaKnown RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 MAS1P04201 325 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 CD37P11049 281 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 GTF2F2P13984 249 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 UTF1Q5T230 341 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 MINOS1Q5TGZ0 78 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 OLFML2AQ68BL7 652 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 DHRS7BQ6IAN0 325 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 OR52W1Q6IF63 320 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 GLIPR1L1Q6UWM5 242 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 LRRTM1Q86UE6 522 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 SUMF2Q8NBJ7 301 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 OR13A1Q8NGR1 328 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 LINC01006Q8NI28 216 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 PHYHIPQ92561 330 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 CNBD2Q96M20 576 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms