RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 Q6P435 159 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SVBPQ8N300 66 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 C1orf162Q8NEQ5 155 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 WNT2BQ93097 391 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 BOD1Q96IK1 185 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 TSNAXQ99598 290 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 CABLES2Q9BTV7 478 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SMIM3Q9BZL3 60 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 NKX6-2Q9C056 277 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 OR2W1Q9Y3N9 320 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 DOCK7Q96N67 2140 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 ESPL1Q14674 2120 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 IGKV1-6A0A0C4DH72 117 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 NKX2-6A6NCS4 301 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 TMEM210A6NLX4 147 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 IQCF6A8MYZ5 107 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 HSD17B6O14756 317 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 FBXO24O75426 580 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 RHBDL1O75783 438 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 LYZL6O75951 148 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SEC11BP0C7V7 166 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 CBR1P16152 277 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 CAV2P51636 162 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 UCP2P55851 309 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SHEQ5VZ18 495 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 GCNT2Q8N0V5 402 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SPAG16Q8N0X2 631 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 C17orf78Q8N4C9 275 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 SCCPDHQ8NBX0 429 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 HRH4Q9H3N8 390 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 TREM1Q9NP99 234 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 CCL28Q9NRJ3 127 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 IGKV1D-13A0A0B4J2D9 117 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 H0Y980 276 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 ABCD4O14678 606 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 CELA3BP08861 270 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 IGKV1-13P0DP09 117 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 TUBG1P23258 451 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 NKX2-1P43699 371 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 OR5D13Q8NGL4 314 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 OR1J1Q8NGS3 322 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 SLC25A40Q8TBP6 338 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 ERGIC1Q969X5 290 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 ADAT1Q9BUB4 502 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 TUBG2Q9NRH3 451 aa16.3■□□□□ 0.2
PRKCSH-209ENST00000589838 CLEC18AA5D8T8 446 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 VDAC1P21796 283 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 F2RL1P55085 397 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 ERVK11-1P61568 191 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 C10orf91Q5T1B1 145 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF324BQ6AW86 544 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 FIP1L1Q6UN15 594 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 ATRAIDQ6UW56 229 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 H1FOOQ8IZA3 346 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 CNEP1R1Q8N9A8 125 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 CLEC18CQ8NCF0 446 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 DMBX1Q8NFW5 382 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 USB1Q9BQ65 265 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 GINS3Q9BRX5 216 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 F8W036 122 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 SH2D1BO14796 132 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 ACAA1P09110 424 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 LPAR6P43657 344 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 OR8G1Q15617 311 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 BTNL8Q6UX41 500 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 C20orf204Q6ZNR8 217 aa16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 CARHSP1Q9Y2V2 147 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-209ENST00000589838 A0A1W2PR80 420 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 PRR33A8MZF0 331 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 PGLYRP1O75594 196 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 PGA5P0DJD9 388 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 MMP9P14780 707 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 RAB5CP51148 216 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 SRSF6Q13247 344 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 C5orf24Q7Z6I8 188 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 MYPOPQ86VE0 399 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 NRIP2Q9BQI9 281 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 SLC25A31Q9H0C2 315 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 UQCC1Q9NVA1 299 aa16.28■□□□□ 0.2
PRKCSH-209ENST00000589838 NXPH2O95156 264 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 WNT2P09544 360 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 ATF4P18848 351 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 COX5AP20674 150 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 AKR1C2P52895 323 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 VAMP2P63027 116 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 AKR1C1Q04828 323 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF169Q14929 603 aaPredicted RBP16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF146Q15072 292 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 OR2C3Q8N628 320 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 SEC11CQ9BY50 192 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 ZDHHC8Q9ULC8 765 aa16.27■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF891A8MT65 544 aaPredicted RBP16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 AHRRA9YTQ3 701 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 ADAM20O43506 726 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 OR2H2O95918 312 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 F2RP25116 425 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms