RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 HDHD3Q9BSH5 251 aaPredicted RBP17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 THAP7Q9BT49 309 aaPredicted RBP17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 PPA2Q9H2U2 334 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 SCPEP1Q9HB40 452 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 MEIS3P1A6NDR6 274 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 MCRIP1C9JLW8 97 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNF737O75373 536 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 CA11O75493 328 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 UPK1BO75841 260 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 GLAP06280 429 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 IFITM3Q01628 133 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 ARFRP1Q13795 201 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 ATPAF1Q5TC12 328 aaPredicted RBP17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 ABCB10Q9NRK6 738 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 KLK11Q9UBX7 282 aa17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 RBMX2Q9Y388 322 aaKnown RBP17.63■□□□□ 0.41
R3HDM4-204ENST00000589428 MALRD1Q5VYJ5 2156 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 A0A1B0GW55 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L2P0CJ85 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L3P0CJ86 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L4P0CJ87 422 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L5P0CJ88 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L6P0CJ89 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L7P0CJ90 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 ZFP36P26651 326 aaKnown RBP17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 OR3A1P47881 315 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 IL13RA1P78552 427 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 WDR25Q64LD2 544 aaPredicted RBP17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4L9Q6RFH8 374 aaPredicted RBP17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 C17orf107Q6ZR85 190 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 TRAPPC6BQ86SZ2 158 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 FAM216BQ8N7L0 139 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 ASCC1Q8N9N2 400 aaKnown RBP17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 NEK7Q8TDX7 302 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 SDSLQ96GA7 329 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 GAFA1Q96PS6 74 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 CHST6Q9GZX3 395 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 DUX4Q9UBX2 424 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 MAB21L2Q9Y586 359 aa17.62■□□□□ 0.41
R3HDM4-204ENST00000589428 A0A1W2PQ09 198 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 KIAA1324LA8MWY0 1029 aaPredicted RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 SULT1C2O00338 296 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 DCTN2Q13561 401 aaKnown RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 C16orf87Q6PH81 154 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNF841Q6ZN19 808 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNF788Q6ZQV5 615 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 MED30Q96HR3 178 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 DVL1O14640 695 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 NDUFB3O43676 98 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ORC5O43913 435 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 SELLP14151 372 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 RBM39Q14498 530 aaKnown RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ATXN7L3Q14CW9 347 aaPredicted RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 LRRC10Q5BKY1 277 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 DCAF12L2Q5VW00 463 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 TRIQKQ629K1 86 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 STEAP3Q658P3 488 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNRF1Q8ND25 227 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 OR4S1Q8NGB4 309 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 PLPPR1Q8TBJ4 325 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 CMSS1Q9BQ75 279 aaKnown RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 SHARPINQ9H0F6 387 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 C12orf4Q9NQ89 552 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 ETAA1Q9NY74 926 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 MTFP1Q9UDX5 166 aa17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 POLR3KQ9Y2Y1 108 aaPredicted RBP17.61■□□□□ 0.41
R3HDM4-204ENST00000589428 PPIAL4CA0A0B4J2A2 164 aa17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 INAFM1C9JVW0 142 aa17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 GDNFP39905 211 aa17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 Q6ZPA2 131 aa17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNF561Q8N587 486 aa17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 NSD1Q96L73 2696 aaPredicted RBP17.6■□□□□ 0.41
R3HDM4-204ENST00000589428 VGLL3A8MV65 326 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 SIGLEC5O15389 551 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 FCER2P06734 321 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 GATA3P23771 443 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 CD276Q5ZPR3 534 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 GVQW1Q8N7I0 195 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 PALMDQ9NP74 551 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 TMEM160Q9NX00 188 aa17.59■□□□□ 0.41
R3HDM4-204ENST00000589428 K7N7A8 449 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 NAPSAO96009 420 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 CR1LQ2VPA4 569 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 FAHD2BQ6P2I3 314 aaPredicted RBP17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 LYSMD2Q8IV50 215 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 TMEM185AQ8NFB2 350 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 FAHD2AQ96GK7 314 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 SNX22Q96L94 193 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 OCSTAMPQ9BR26 566 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 ZNF230Q9UIE0 474 aaPredicted RBP17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 ANAPC10Q9UM13 185 aa17.58■□□□□ 0.41
R3HDM4-204ENST00000589428 LOC105371242A0A075B767 164 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 RBBP9O75884 186 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 CSN2P05814 226 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 FCGR3AP08637 254 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 HNF1AP20823 631 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 MRPS15P82914 257 aaKnown RBP17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 GRK1Q15835 563 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 BTNL3Q6UXE8 466 aa17.58■□□□□ 0.4
R3HDM4-204ENST00000589428 ZNF497Q6ZNH5 498 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms