RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 BHLHE23Q8NDY6 225 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 SLAMF9Q96A28 289 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 MSI2Q96DH6 328 aaKnown RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 POM121L2Q96KW2 1035 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM222Q9H0R3 208 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 Q9N2K0 584 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 RNASEK-C17orf49H0YIS7 233 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 M0R296 226 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 DNASE2O00115 360 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 HSPA12AO43301 675 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TNFSF15O95150 251 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 CD59P13987 128 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 CTRB1P17538 263 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 BCL3P20749 454 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 ARHGDIBP52566 201 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 AKR1C2P52895 323 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 VAMP2P63027 116 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 AKR1C1Q04828 323 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 PEA15Q15121 130 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM268Q5VZI3 342 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 FBXW9Q5XUX1 488 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 CTRB2Q6GPI1 263 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 ATRAIDQ6UW56 229 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 MEX3BQ6ZN04 569 aaKnown RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 Q8IYB0 196 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 KIRREL1Q96J84 757 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 LIME1Q9H400 295 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 PLA2G3Q9NZ20 509 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 NDRG3Q9UGV2 375 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 PRELID1Q9Y255 219 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 STRAPQ9Y3F4 350 aaKnown RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TNRC18O15417 2968 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 MYO7BQ6PIF6 2116 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 NAPSAO96009 420 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PRH1P02810 166 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 CCL2P13500 99 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PRKACAP17612 351 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 GNRHRP30968 328 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 NKX2-1P43699 371 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 IL24Q13007 206 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TBC1D28Q2M2D7 210 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 IGSF11Q5DX21 431 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 FAM209BQ5JX69 171 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 SLC35G3Q8N808 338 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 ZFP62Q8NB50 900 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 OR10J5Q8NHC4 309 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 SECTM1Q8WVN6 248 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 OR5P3Q8WZ94 311 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 DYRK2Q92630 601 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 MARS2Q96GW9 593 aaKnown RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PBDC1Q9BVG4 233 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PKIBQ9C010 78 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 GLRX2Q9NS18 164 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 RCC2Q9P258 522 aaKnown RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 AMDHD2Q9Y303 409 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM56-RWDD3S4R434 201 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TRGV5A0A0B4J1U4 118 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 SLC22A20A6NK97 555 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TRIM77I1YAP6 450 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 WRBO00258 174 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 MMP9P14780 707 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 VDAC1P21796 283 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 MDH2P40926 338 aaKnown RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 CAMLGP49069 296 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 ARG2P78540 354 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 FLI1Q01543 452 aaPredicted RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 BTNL8Q6UX41 500 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 NUFIP2Q7Z417 695 aaKnown RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 P4HA3Q7Z4N8 544 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TBC1D26Q86UD7 250 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PUSL1Q8N0Z8 303 aaKnown RBP6.33□□□□□ -1.4
ZNF540-206ENST00000589117 FAM58AQ8N1B3 248 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 LFNGQ8NES3 379 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 OR4A4PQ8NGN8 299 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 IL22RA2Q969J5 263 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 NRIP2Q9BQI9 281 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 GINS3Q9BRX5 216 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 HES7Q9BYE0 225 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TLNRD1Q9H1K6 362 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 ARV1Q9H2C2 271 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 PLEKHF2Q9H8W4 249 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 MTCH1Q9NZJ7 389 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF581Q9P0T4 197 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 MLXQ9UH92 298 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 POLDIP2Q9Y2S7 368 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF175Q9Y473 711 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 KPTNQ9Y664 436 aa6.33□□□□□ -1.4
ZNF540-206ENST00000589117 TRBV6-6A0A0A6YYG2 114 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 UMAD1C9J7I0 102 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 ATP6V1G2-DDX39BF2Z307 99 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 MSTNO14793 375 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 DEGS1O15121 323 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 SS18L1O75177 396 aaPredicted RBP6.32□□□□□ -1.4
ZNF540-206ENST00000589117 DANCRP0C864 163 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 GLI4P10075 376 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 COL8A1P27658 744 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 CD82P27701 267 aa6.32□□□□□ -1.4
ZNF540-206ENST00000589117 LPAR6P43657 344 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms