RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SLC33A1O00400 549 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 WNT9BO14905 357 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 NOS1APO75052 506 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 RGS11O94810 467 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 OR2H2O95918 312 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 HAND1O96004 215 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 NFYAP23511 347 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 CD40P25942 277 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 GLRXP35754 106 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 MDH2P40926 338 aaKnown RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF81P51508 661 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 KLF3P57682 345 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 NKX6-1P78426 367 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 SORDQ00796 357 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 KIR2DS1Q14954 304 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 SRSF7Q16629 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMAD4-206ENST00000588860 ABCA11PQ4W5N1 156 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 IGSF11Q5DX21 431 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 SPIN3Q5JUX0 258 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 DHRS11Q6UWP2 260 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 C11orf53Q8IXP5 236 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 OR5T2Q8NGG2 359 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 DHRS9Q9BPW9 319 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 TLNRD1Q9H1K6 362 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 JKAMPQ9P055 326 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 OR14J1Q9UGF5 321 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 SHPKQ9UHJ6 478 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 GLS2Q9UI32 602 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 CACNA1DQ01668 2161 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 ICE1Q9Y2F5 2266 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 FBN2P35556 2912 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 TEX13DA0A0J9YY54 714 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 C13orf42A0A1B0GVH6 325 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 A0A1B0GWJ7 208 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 PLSCR5A0PG75 271 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 C5orf51A6NDU8 294 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 CRYM-AS1A6NIL9 109 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ZSCAN5BA6NJL1 495 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 DBX1A6NMT0 343 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 L7N2F9 121 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 BET1O15155 118 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ATP6V1G1O75348 118 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 DIRAS3O95661 229 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 IFNA2P01563 188 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 IGHV3-13P01766 116 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ACAA1P09110 424 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SCTP09683 121 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 HLA-GP17693 338 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SSTR2P30874 369 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SERPINF1P36955 418 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 RBMXP38159 391 aaKnown RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 CD200P41217 278 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 CEBPDP49716 269 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SEC61A1P61619 476 aaKnown RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SUPT4H1P63272 117 aaKnown RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 HLA-DRB3P79483 266 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SRSF4Q08170 494 aaKnown RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ATXN7L3Q14CW9 347 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF146Q15072 292 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 LGALSLQ3ZCW2 172 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-206ENST00000588860 WDR82Q6UXN9 313 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 GSG1LQ6UXU4 331 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ACP7Q6ZNF0 438 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 C22orf34Q6ZV56 151 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 C5orf24Q7Z6I8 188 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SGPP2Q8IWX5 399 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SLC38A6Q8IZM9 456 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 PLPPR1Q8TBJ4 325 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 LRRC29Q8WV35 223 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 MOB3AQ96BX8 217 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 PIK3IP1Q96FE7 263 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ELMOD3Q96FG2 381 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 SEC22AQ96IW7 307 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 DMRTA2Q96SC8 542 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 VKORC1Q9BQB6 163 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 HES4Q9HCC6 221 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 COMMD9Q9P000 198 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 TAAR3PQ9P1P4 343 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 MEMO1Q9Y316 297 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 ATP23Q9Y6H3 246 aa7.4□□□□□ -1.22
SMAD4-206ENST00000588860 DSCAMO60469 2012 aa7.4□□□□□ -1.23
SMAD4-206ENST00000588860 TLN1Q9Y490 2541 aaKnown RBP7.4□□□□□ -1.23
SMAD4-206ENST00000588860 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.23
SMAD4-206ENST00000588860 POLEQ07864 2286 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 TRAV14DV4A0A0A6YYC5 116 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RFPL4AA6NLU0 287 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RFPL4AL1F8VTS6 287 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 H7C1Q1 480 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 ARPC5O15511 151 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 SPRY3O43610 288 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 PPYP01298 95 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 CD8AP01732 235 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 TK1P04183 234 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 THBDP07204 575 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 RPS2P15880 293 aaKnown RBP7.39□□□□□ -1.23
SMAD4-206ENST00000588860 CXCL2P19875 107 aa7.39□□□□□ -1.23
SMAD4-206ENST00000588860 C4BPBP20851 252 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms