RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 BNIP1Q12981 228 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 FADDQ13158 208 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 USF2Q15853 346 aaPredicted RBP4.81□□□□□ -1.64
TPM4-210ENST00000588507 LCN1P1Q5VSP4 162 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 BTNL8Q6UX41 500 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 ZNF66Q6ZN08 573 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 ZNF497Q6ZNH5 498 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 Q6ZRN7 208 aaPredicted RBP4.81□□□□□ -1.64
TPM4-210ENST00000588507 PTCHD4Q6ZW05 846 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 EIF1ADQ8N9N8 165 aaKnown RBP4.81□□□□□ -1.64
TPM4-210ENST00000588507 ZNF114Q8NC26 417 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 DNAAF1Q8NEP3 725 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 AGR3Q8TD06 166 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 VPS33AQ96AX1 596 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 USMG5Q96IX5 58 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 MYCBPQ99417 103 aaPredicted RBP4.81□□□□□ -1.64
TPM4-210ENST00000588507 PAFAH2Q99487 392 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 Q9H3A6 140 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 NIPAL2Q9H841 368 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 IDI2-AS1Q9NZ38 188 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 ZNF319Q9P2F9 582 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 CORO2BQ9UQ03 480 aa4.81□□□□□ -1.64
TPM4-210ENST00000588507 A0A087WTM6 91 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 C15orf61A6NNL5 157 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 HMGB1P1B2RPK0 211 aaPredicted RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 TXNL1O43396 289 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 APOC1P02654 83 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 CALRP27797 417 aaKnown RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 RPS27P42677 84 aaKnown RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 CDKN2AP42771 156 aaKnown RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 ELLP55199 621 aaPredicted RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 DEFA5Q01523 94 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 LTC4SQ16873 150 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 LIPKQ5VXJ0 399 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 PLCXD3Q63HM9 321 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 TMEM88Q6PEY1 159 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 MORN3Q6PF18 240 aaPredicted RBP4.8□□□□□ -1.64
TPM4-210ENST00000588507 FAM131AQ6UXB0 335 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 TIFABQ6ZNK6 161 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 KRT74Q7RTS7 529 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 DCXRQ7Z4W1 244 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 CROCCP2Q86T23 111 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 FAM156AQ8NDB6 213 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 SETD9Q8NE22 299 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 NPBQ8NG41 125 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 OR5T1Q8NG75 326 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 OR1L1Q8NH94 360 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 PGAM5Q96HS1 289 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 RITA1Q96K30 269 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 MAGT1Q9H0U3 335 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 ZNF180Q9UJW8 692 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 EMCNQ9ULC0 261 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 SNX12Q9UMY4 172 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 X6R8D5 127 aa4.8□□□□□ -1.64
TPM4-210ENST00000588507 ZNF705EA8MWA4 302 aaPredicted RBP4.79□□□□□ -1.64
TPM4-210ENST00000588507 EFCAB9A8MZ26 197 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 NDUFAB1O14561 156 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 CHRNGP07510 517 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 DNAH10OSP0CZ25 163 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 CGB3P0DN86 165 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 CGB7P0DN87 165 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 HOXB9P17482 250 aaPredicted RBP4.79□□□□□ -1.64
TPM4-210ENST00000588507 MPZP25189 248 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 GSTT1P30711 240 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 HTR1FP30939 366 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 VHLP40337 213 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 SLC15A1P46059 708 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 MNAT1P51948 309 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 GRB2P62993 217 aaKnown RBP4.79□□□□□ -1.64
TPM4-210ENST00000588507 GNGT1P63211 74 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 ZNF91Q05481 1191 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 IFFO1Q0D2I5 559 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 GCNT6Q5T4J0 391 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 ENTHD1Q8IYW4 607 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 GPR32P1Q8NGA4 272 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 OR13C2Q8NGS9 318 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 FAM81AQ8TBF8 368 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 SLAMF6Q96DU3 332 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 SPAG4Q9NPE6 437 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 MRPL22Q9NWU5 206 aaKnown RBP4.79□□□□□ -1.64
TPM4-210ENST00000588507 CALYQ9NYX4 217 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 DCDC2Q9UHG0 476 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 LINC00588Q9Y4M8 146 aa4.79□□□□□ -1.64
TPM4-210ENST00000588507 TMEM213A2RRL7 107 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 OR4C46A6NHA9 309 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 ZNF878C9JN71 531 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 F8VVB4 439 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 F8VWA3 439 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 CLIC1O00299 241 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 FCN1O00602 326 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 TSPAN4O14817 238 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 NDUFA3O95167 84 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 C1QBP02746 253 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 HTN3P15516 51 aa4.78□□□□□ -1.64
TPM4-210ENST00000588507 HSD11B1P28845 292 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms