RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SSX4O60224 188 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 PEX14O75381 377 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 OR2H2O95918 312 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 TCRBP04435 133 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 DAOP14920 347 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 BTCP35070 178 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 GLP1RP43220 463 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 FAHD2BQ6P2I3 314 aaPredicted RBP10.57□□□□□ -0.72
VMP1-202ENST00000585847 C11orf88Q6PI97 169 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 ZNF826PQ6ZT77 177 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 ZNF561Q8N587 486 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 GCSAMQ8N6F7 178 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 ZDHHC22Q8N966 263 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 GCDHQ92947 438 aaPredicted RBP10.57□□□□□ -0.72
VMP1-202ENST00000585847 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 FAHD2AQ96GK7 314 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 OCEL1Q9H607 264 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 CHMP1AQ9HD42 196 aaPredicted RBP10.57□□□□□ -0.72
VMP1-202ENST00000585847 LPAR3Q9UBY5 353 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 WIPI2Q9Y4P8 454 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 TRAV24A0A0B4J272 114 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 LINC00854A0A1B0GVQ3 168 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 OR2AT4A6NND4 320 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 NPIPB11E5RHQ5 1161 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 INMT-MINDY4F8WBC2 141 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 LGALS8O00214 317 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 SLC33A1O00400 549 aaPredicted RBP10.56□□□□□ -0.72
VMP1-202ENST00000585847 AMY2AP04746 511 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 GIFP27352 417 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 TAS2R31P59538 309 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 C11orf91Q3C1V1 193 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 RNASE12Q5GAN4 147 aaKnown RBP10.56□□□□□ -0.72
VMP1-202ENST00000585847 C6orf183Q5T699 404 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 ATPAF1Q5TC12 328 aaPredicted RBP10.56□□□□□ -0.72
VMP1-202ENST00000585847 SLC35E4Q6ICL7 350 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 PRSS57Q6UWY2 283 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 OVCH2Q7RTZ1 564 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 BPIFB2Q8N4F0 458 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 OR4A4PQ8NGN8 299 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 RDH5Q92781 318 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 SNX22Q96L94 193 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 C20orf85Q9H1P6 137 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 BARX1Q9HBU1 254 aaPredicted RBP10.56□□□□□ -0.72
VMP1-202ENST00000585847 UFSP2Q9NUQ7 469 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 CR1P17927 2039 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 VPS13CQ709C8 3753 aa10.56□□□□□ -0.72
VMP1-202ENST00000585847 ZNF469Q96JG9 3925 aaPredicted RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 A0A096LNT2 108 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 IGHV1-69-2A0A0G2JMI3 117 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 OOEPA6NGQ2 149 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 VWC2LB2RUY7 222 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 F8VVB4 439 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 F8VWA3 439 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 MGST3O14880 152 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 MT-ND4P03905 459 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 TK1P04183 234 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 IL5P05113 134 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 ERP29P30040 261 aaKnown RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 PRDX2P32119 198 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 HRH1P35367 487 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 HFEQ30201 348 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 Q5PR19 223 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 FAM201AQ5SY85 155 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 METTL11BQ5VVY1 283 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 RSBN1Q5VWQ0 802 aaPredicted RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 STUMQ69YW2 141 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 ZNF880Q6PDB4 577 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 IDO2Q6ZQW0 420 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 Q71RC1 249 aaPredicted RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 PEG10Q86TG7 708 aaKnown RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 MUC20Q8N307 709 aaPredicted RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 WFDC11Q8NEX6 87 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 OR6F1Q8NGZ6 308 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 C10orf105Q8TEF2 133 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 C18orf12Q96KH6 178 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 ZNF488Q96MN9 340 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 TMEM165Q9HC07 324 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 GPN1Q9HCN4 374 aaPredicted RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 Q9N2K0 584 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
VMP1-202ENST00000585847 TMEM106BQ9NUM4 274 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 KCNIP1Q9NZI2 227 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 PCDHB10Q9UN67 800 aa10.55□□□□□ -0.72
VMP1-202ENST00000585847 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 SNRPGP15A8MWD9 76 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
VMP1-202ENST00000585847 GPR37O15354 613 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms