RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TMEM187Q14656 261 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 ZNF146Q15072 292 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 LRRC37A5PQ49AS3 106 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 PAN3Q58A45 887 aaKnown RBP9.57□□□□□ -0.88
LIG3-204ENST00000585740 RGS7BPQ6MZT1 257 aaPredicted RBP9.57□□□□□ -0.88
LIG3-204ENST00000585740 SSX8Q7RTT4 187 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 WDR86Q86TI4 376 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 LGI3Q8N145 548 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 OR5T2Q8NGG2 359 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 MUCL1Q96DR8 90 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 ZNF488Q96MN9 340 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 TLNRD1Q9H1K6 362 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 LIME1Q9H400 295 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 SLC2A9Q9NRM0 540 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 MBD2Q9UBB5 411 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 AUP1Q9Y679 476 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 SVILO95425 2214 aa9.57□□□□□ -0.88
LIG3-204ENST00000585740 COL6A6A6NMZ7 2263 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 A0A1B0GWJ7 208 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 RPS10-NUDT3A0A1W2PQS6 291 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 NPIPB11E5RHQ5 1161 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 K7ENP7 123 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 GPR31O00270 319 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 ADAP1O75689 374 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 RHBDL1O75783 438 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 TUSC2O75896 110 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 RLN2P04090 185 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 HOXB5P09067 269 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 DUSP1P28562 367 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 KCNJ3P48549 501 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 RPS23P62266 143 aaKnown RBP9.56□□□□□ -0.88
LIG3-204ENST00000585740 TBR1Q16650 682 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
LIG3-204ENST00000585740 Q6ZPA2 131 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 RDH5Q92781 318 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 PHYHIPLQ96FC7 376 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 ARPC5LQ9BPX5 153 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 CABLES2Q9BTV7 478 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 HES4Q9HCC6 221 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 MED9Q9NWA0 146 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 IL36RNQ9UBH0 155 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 TUBD1Q9UJT1 453 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 TP53TG5Q9Y2B4 290 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 SHANK1Q9Y566 2161 aa9.56□□□□□ -0.88
LIG3-204ENST00000585740 UNC79Q9P2D8 2635 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 PIEZO2Q9H5I5 2752 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 RNF222A6NCQ9 220 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 K7EM74 188 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 CDIPTO14735 213 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 HS3ST1O14792 307 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 MLNRO43193 412 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 OR2H2O95918 312 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 GRPP07492 148 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 GLI4P10075 376 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 UCNP55089 124 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 IL15RAQ13261 267 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 IAH1Q2TAA2 248 aaPredicted RBP9.55□□□□□ -0.88
LIG3-204ENST00000585740 ALKBH6Q3KRA9 238 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 PHLDA2Q53GA4 152 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 IGSF11Q5DX21 431 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 GGNBP1Q5YKI7 109 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 GAPTQ8N292 157 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 PRR7Q8TB68 274 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 ST8SIA2Q92186 375 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 KIRREL1Q96J84 757 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 SLC5A7Q9GZV3 580 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 SLC25A32Q9H2D1 315 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 TMEM165Q9HC07 324 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 ELOVL5Q9NYP7 299 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 TINAGQ9UJW2 476 aa9.55□□□□□ -0.88
LIG3-204ENST00000585740 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 LEUTXA8MZ59 168 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 H0YL77 283 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 M0R1B8 84 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 SLC33A1O00400 549 aaPredicted RBP9.54□□□□□ -0.88
LIG3-204ENST00000585740 BET1O15155 118 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 MPPED1O15442 326 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 HAND1O96004 215 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 CRYAAP02489 173 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 SCTP09683 121 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 OR5AC1P0C628 307 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 LMO1P25800 156 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 GLRXP35754 106 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 CD200P41217 278 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 FABP6P51161 128 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 TDGF1P3P51864 188 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 TMPRSS3P57727 454 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
LIG3-204ENST00000585740 RBPJQ06330 500 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 ATXN7L3Q14CW9 347 aaPredicted RBP9.54□□□□□ -0.88
LIG3-204ENST00000585740 ZNF497Q6ZNH5 498 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 MRGPRGQ86SM5 289 aa9.54□□□□□ -0.88
LIG3-204ENST00000585740 CMTM1Q8IZ96 169 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms