RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 BNIP1Q12981 228 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 KIR2DS1Q14954 304 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 RSBN1Q5VWQ0 802 aaPredicted RBP11.37□□□□□ -0.59
SDF2-202ENST00000585428 SERPINA12Q8IW75 414 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 PARP16Q8N5Y8 322 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 OR5D14Q8NGL3 314 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 RFESDQ8TAC1 157 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 NEK6Q9HC98 313 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 SCOCQ9UIL1 159 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 KIAA2026Q5HYC2 2103 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 J3QLW9 94 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 ZNF19P17023 458 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 CDX1P47902 265 aaPredicted RBP11.36□□□□□ -0.59
SDF2-202ENST00000585428 ZNF816Q0VGE8 651 aaPredicted RBP11.36□□□□□ -0.59
SDF2-202ENST00000585428 ALKBH1Q13686 389 aaKnown RBP11.36□□□□□ -0.59
SDF2-202ENST00000585428 PNLIPRP3Q17RR3 467 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 Q8N6K4 173 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 RNF152Q8N8N0 203 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 PXT1Q8NFP0 134 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 NR1H4Q96RI1 486 aaPredicted RBP11.36□□□□□ -0.59
SDF2-202ENST00000585428 ABCG5Q9H222 651 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 RIBC2Q9H4K1 309 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 PLSCR3Q9NRY6 295 aa11.36□□□□□ -0.59
SDF2-202ENST00000585428 EXOGQ9Y2C4 368 aaKnown RBP11.36□□□□□ -0.59
SDF2-202ENST00000585428 AP4M1O00189 453 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 HSPB6O14558 160 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 GAPDHP04406 335 aaKnown RBP11.35□□□□□ -0.59
SDF2-202ENST00000585428 RPLP1P05386 114 aaKnown RBP11.35□□□□□ -0.59
SDF2-202ENST00000585428 GZMHP20718 246 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 GLP1RP43220 463 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 PAN3Q58A45 887 aaKnown RBP11.35□□□□□ -0.59
SDF2-202ENST00000585428 ZNF691Q5VV52 312 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 ZNF529Q6P280 563 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 TGIF2LXQ8IUE1 241 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 ACBD7Q8N6N7 88 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 Q8N9W7 124 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 PLPPR1Q8TBJ4 325 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 MRGPRDQ8TDS7 321 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 RNFT2Q96EX2 444 aa11.35□□□□□ -0.59
SDF2-202ENST00000585428 EAF1Q96JC9 268 aaPredicted RBP11.35□□□□□ -0.59
SDF2-202ENST00000585428 TRAV39A0A0B4J263 110 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 IGHV1-3A0A0C4DH29 117 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 SULT1B1O43704 296 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 HCKP08631 526 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 RPSAP08865 295 aaKnown RBP11.34□□□□□ -0.59
SDF2-202ENST00000585428 GPR12P47775 334 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 KCNJ3P48549 501 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 GNG10P50151 68 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 SNRPGP62308 76 aaKnown RBP11.34□□□□□ -0.59
SDF2-202ENST00000585428 LTC4SQ16873 150 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 LCNL1Q6ZST4 164 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 OR10X1Q8NGY0 326 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 ST6GALNAC6Q969X2 333 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 CENPNQ96H22 339 aaPredicted RBP11.34□□□□□ -0.59
SDF2-202ENST00000585428 C4orf36Q96KX1 117 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 GON7Q9BXV9 100 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 LIN7CQ9NUP9 197 aaKnown RBP11.34□□□□□ -0.59
SDF2-202ENST00000585428 OAZ3Q9UMX2 235 aa11.34□□□□□ -0.59
SDF2-202ENST00000585428 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 NCBP2LA6PVI3 153 aaKnown RBP11.33□□□□□ -0.6
SDF2-202ENST00000585428 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 CCRL2O00421 344 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 HSD17B6O14756 317 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 ELANEP08246 267 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 SSTR5P35346 364 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 LUMP51884 338 aaPredicted RBP11.33□□□□□ -0.6
SDF2-202ENST00000585428 CFHR3Q02985 330 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 FOXE3Q13461 319 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 GPR50Q13585 617 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 GALEQ14376 348 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 IL13RA2Q14627 380 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 MEDAGQ5VYS4 303 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 MOB3BQ86TA1 216 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 LHFPL3Q86UP9 236 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 C8orf31Q8N9H6 132 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 TMEM104Q8NE00 496 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 OR5M8Q8NGP6 311 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 OR8U1Q8NH10 309 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 PRR25Q96S07 402 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 IFT22Q9H7X7 185 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
SDF2-202ENST00000585428 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
SDF2-202ENST00000585428 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 E9PI62 339 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 C15orf65H3BRN8 121 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 MPZL2O60487 215 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 FCGR1AP12314 374 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 CD1BP29016 333 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 RAB25P57735 213 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 IZUMO1Q8IYV9 350 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 SUMF2Q8NBJ7 301 aa11.32□□□□□ -0.6
SDF2-202ENST00000585428 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms