RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ID3Q02535 119 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PRDX4Q13162 271 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SPSB3Q6PJ21 355 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RBMS3Q6XE24 437 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ODF3L1Q8IXM7 274 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR5C1Q8NGR4 320 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SIGLEC12Q96PQ1 595 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MAGT1Q9H0U3 335 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GLRX2Q9NS18 164 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FREM2Q5SZK8 3169 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A1W2PPE2 198 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PINLYPA6NC86 204 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 BTBD17A6NE02 478 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HSPA12AO43301 675 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MRPL33O75394 65 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RAC2P15153 192 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GPM6AP51674 278 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 VAMP2P63027 116 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GPHA2Q96T91 129 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TCFL5Q9UL49 500 aa12.17□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGKV3D-15A0A087WSY6 115 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CDRT15L2A8MXV6 281 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TMEM50AO95807 157 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MMP9P14780 707 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CYB561P49447 251 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MPV17LQ2QL34 196 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SP5Q6BEB4 398 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 C16orf54Q6UWD8 224 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CRIM1Q9NZV1 1036 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ATP23Q9Y6H3 246 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CCNOP22674 350 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ARF1P84077 181 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 BAXQ07812 192 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HIKESHIQ53FT3 197 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ADAM5Q6NVV9 412 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 LINC00470Q9BZP3 86 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 KIAA1456Q9P272 454 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IL36RNQ9UBH0 155 aa12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 S100A9P06702 114 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 DYNLT3P51808 116 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 TSC22D1Q15714 1073 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 ZDHHC23Q8IYP9 409 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 UNKLQ9H9P5 680 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CCL28Q9NRJ3 127 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 DMDP11532 3685 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 HSD17B6O14756 317 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CST7O76096 145 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 SLC34A2O95436 690 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CCL2P13500 99 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 CMTM1Q8IZ96 169 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IL22RA1Q8N6P7 574 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 OR5D13Q8NGL4 314 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 MAFAQ8NHW3 353 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 IL22RA2Q969J5 263 aa12.15□□□□□ -0.46
CDK5RAP3-237ENST00000585163 A0A096LPE4 126 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 A0A1W2PPZ6 126 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 H0Y980 276 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR2B8PP59922 312 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 MRPL21Q7Z2W9 205 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 MKXQ8IYA7 352 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TCEAL7Q9BRU2 100 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RNF115Q9Y4L5 304 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TNRC6AQ8NDV7 1962 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 B4E171 279 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TRAPPC2LH3BP13 241 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HSPB6O14558 160 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CHST1O43916 411 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR2C1O95371 312 aa12.14□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HLA-HP01893 362 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms