RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 HSF4Q9ULV5 492 aa13.2□□□□□ -0.3
CSNK1D-223ENST00000584472 KIR2DS1A0A191URI9 304 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 MGST3O14880 152 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 PPIAL4GP0DN37 164 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 PAX8Q06710 450 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 C1orf229Q6ZS94 237 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 LAX1Q8IWV1 398 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 PHF21AQ96BD5 680 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 RAB3CQ96E17 227 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 ARHGAP5-AS1Q96IT6 56 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 SULT4A1Q9BR01 284 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 PECRQ9BY49 303 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 DIABLOQ9NR28 239 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
CSNK1D-223ENST00000584472 C22orf46C9J442 243 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 XRCC3O43542 346 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 AVPP01185 164 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 LIPFP07098 398 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 NDUFB7P17568 137 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 CDK2P24941 298 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 KCNJ3P48549 501 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 AUP1Q9Y679 476 aa13.18□□□□□ -0.3
CSNK1D-223ENST00000584472 A0A0A6YYJ9 748 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 FAM25AB3EWG3 89 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 FAM25CB3EWG5 89 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 FAM25GB3EWG6 89 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 MFNGO00587 321 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 FSHBP01225 129 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 PAX5Q02548 391 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 AESQ08117 197 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 DTX3Q8N9I9 347 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 COQ2Q96H96 371 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 DMRTB1Q96MA1 342 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 ZMAT3Q9HA38 289 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.38e-7■■■■□ 19.3
CSNK1D-223ENST00000584472 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
CSNK1D-223ENST00000584472 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 CLPXO76031 633 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 GNB3P16520 340 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 P2RX3P56373 397 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 EDDM3BP56851 147 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 ZNF260Q3ZCT1 412 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 RSBN1Q5VWQ0 802 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 ZNF497Q6ZNH5 498 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 BTN2A1Q7KYR7 527 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 H1FXQ92522 213 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 DYRK2Q92630 601 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 WDFY2Q96P53 400 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 AK3Q9UIJ7 227 aa13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 RPUSD1Q9UJJ7 312 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-223ENST00000584472 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 CA11O75493 328 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 GSTP1P09211 210 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 TNFSF8P32971 234 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 S100A5P33763 92 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 GLIPR1P48060 266 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 TAS2R20P59543 309 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 KRTAP24-1Q3LI83 254 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 GAPTQ8N292 157 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 TPRX1Q8N7U7 411 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 UPRTQ96BW1 309 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 KIAA2026Q5HYC2 2103 aa13.15□□□□□ -0.3
CSNK1D-223ENST00000584472 TMEM30CPA0ZSE6 113 aa13.14□□□□□ -0.31
CSNK1D-223ENST00000584472 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
CSNK1D-223ENST00000584472 HLA-DQB1P01920 261 aa13.14□□□□□ -0.31
CSNK1D-223ENST00000584472 MT-ND4P03905 459 aa13.14□□□□□ -0.31
CSNK1D-223ENST00000584472 MELTFP08582 738 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms