RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ATXN7L3Q14CW9 347 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 KRBOX4Q5JUW0 171 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NLRC3Q7RTR2 1065 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FGFRL1Q8N441 504 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OR8B3Q8NGG8 313 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OR52I2Q8NH67 350 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NUDCD2Q8WVJ2 157 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FCAMRQ8WWV6 532 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OR8B2Q96RD0 313 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OCSTAMPQ9BR26 566 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 HDHD3Q9BSH5 251 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NARFLQ9H6Q4 476 aa13.56□□□□□ -0.24
CDK5RAP3-228ENST00000583363 TRBV6-6A0A0A6YYG2 114 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FUOMA2VDF0 154 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 POM121CA8CG34 1229 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 H7C1Q1 480 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 IGHV2-5P01817 119 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 LPLP06858 475 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SLC25A16P16260 332 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NDUFB7P17568 137 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GLIPR1P48060 266 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 NPY4RP50391 375 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 DGCR2P98153 550 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 Q5PR19 223 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GDPD3Q7L5L3 318 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 TRAPPC6BQ86SZ2 158 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 Q8N402 240 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MRPL30Q8TCC3 161 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SMIM4Q8WVI0 70 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ING3Q9NXR8 418 aa13.55□□□□□ -0.24
CDK5RAP3-228ENST00000583363 FBN3Q75N90 2809 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 IGHV4-61A0A0C4DH41 118 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 TMEM30CPA0ZSE6 113 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GPR37O15354 613 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 DTYMKP23919 212 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CBX5P45973 191 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 P2RX3P56373 397 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MRPS15P82914 257 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 EDDM3AQ14507 147 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 BAK1Q16611 211 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 Q6ZPA2 131 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 KLK11Q9UBX7 282 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 KIF25Q9UIL4 384 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MALRD1Q5VYJ5 2156 aa13.54□□□□□ -0.24
CDK5RAP3-228ENST00000583363 DOCK11Q5JSL3 2073 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ODAMA1E959 279 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MEIS3P1A6NDR6 274 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 J3QRK9 145 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 LANCL1O43813 399 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RBBP9O75884 186 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SEC61A1P61619 476 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 SRSF7Q16629 238 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CR1LQ2VPA4 569 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CLEC9AQ6UXN8 241 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 HOGA1Q86XE5 327 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 GVQW1Q8N7I0 195 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 TPRX1Q8N7U7 411 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 OR4K15Q8NH41 348 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CCDC107Q8WV48 283 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 Q9N2K0 584 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 C12orf4Q9NQ89 552 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 CLN8Q9UBY8 286 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ZNF230Q9UIE0 474 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 RBMX2Q9Y388 322 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-228ENST00000583363 JMJD1CQ15652 2540 aa13.52□□□□□ -0.24
CDK5RAP3-228ENST00000583363 MEIKINA0A087WXM9 373 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ORC5O43913 435 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 FCGR3AP08637 254 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 NAT1P18440 290 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 USF1P22415 310 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 EDDM3BP56851 147 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GNB2P62879 340 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 SSBP1Q04837 148 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MEF2CQ06413 473 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 C11orf91Q3C1V1 193 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CORO2AQ92828 525 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RAB39BQ96DA2 213 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CCDC32Q9BV29 185 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 MBNL3Q9NUK0 354 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 TRAPPC2LQ9UL33 140 aa13.52□□□□□ -0.25
CDK5RAP3-228ENST00000583363 A0A096LNT2 108 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ECDO95905 644 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 HEXAP06865 529 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CGB3P0DN86 165 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 CGB7P0DN87 165 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 RCC1P18754 421 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 GDNFP39905 211 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 ESCO2Q56NI9 601 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 Q6ZS49 121 aa13.51□□□□□ -0.25
CDK5RAP3-228ENST00000583363 BTN2A1Q7KYR7 527 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms