RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF346Q9UL40 294 aaKnown RBP3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 RHBDD3Q9Y3P4 386 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 OR1A2Q9Y585 309 aa3.17□□□□□ -1.9
SMCHD1-208ENST00000583344 MYOFQ9NZM1 2061 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 SZT2Q5T011 3432 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TVP23AA6NH52 213 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 COLCA2A8K830 154 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 C2orf74A8MZ97 194 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF736B4DX44 427 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CCL24O00175 119 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 SULT2B1O00204 365 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 DCTN6O00399 190 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TAAR5O14804 337 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 NUPL2O15504 423 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF208O43345 1280 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 SCGNO76038 276 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 RPP14O95059 124 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 RENP00797 406 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CSTAP01040 98 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 IGHEP01854 428 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MAS1P04201 325 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CD5P06127 495 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CRHP06850 196 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TPT1P13693 172 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ABOP16442 354 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 HTR2CP28335 458 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CD34P28906 385 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CD1CP29017 333 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 AQP2P41181 271 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CX3CR1P49238 355 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 EFNB2P52799 333 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 UBE2IP63279 158 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 QRFPP83859 136 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 DEFA5Q01523 94 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 OC90Q02509 493 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 PJVKQ0ZLH3 352 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ZP4Q12836 540 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 IL15RAQ13261 267 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 DHRS2Q13268 280 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 RUNX3Q13761 415 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ELOCQ15369 112 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 C15orf32Q32M92 178 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MESTQ5EB52 335 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TCEAL5Q5H9L2 206 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM244Q5VVB8 128 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM225Q6GV28 225 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ASPHD2Q6ICH7 369 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 VITQ6UXI7 678 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 PARGQ86W56 976 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 GTPBP8Q8N3Z3 284 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 BPIFB2Q8N4F0 458 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF615Q8N8J6 731 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 INO80EQ8NBZ0 244 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 OR1S2Q8NGQ3 325 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 OR6K6Q8NGW6 343 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 LYPD6BQ8NI32 183 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 PPP1R1CQ8WVI7 109 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ARL11Q969Q4 196 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 RERGQ96A58 199 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MRGPRFQ96AM1 343 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 C8orf44Q96CB5 159 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 RASD2Q96D21 266 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 NARS2Q96I59 477 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 SMIM8Q96KF7 97 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 BMFQ96LC9 184 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 DEFB118Q96PH6 123 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 OR5B2Q96R09 309 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 OR2M4Q96R27 311 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TSNAXQ99598 290 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 PHB2Q99623 299 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CDX2Q99626 313 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 LPAR4Q99677 370 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 TLNRD1Q9H1K6 362 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ATG5Q9H1Y0 275 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 SAV1Q9H4B6 383 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 C8orf33Q9H7E9 229 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ELOVL3Q9HB03 270 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MMP26Q9NRE1 261 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 UBQLN4Q9NRR5 601 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 UQCC1Q9NVA1 299 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MBD2Q9UBB5 411 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MLXQ9UH92 298 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF230Q9UIE0 474 aaPredicted RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 ANAPC10Q9UM13 185 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 B9D1Q9UPM9 204 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MRPS33Q9Y291 106 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 KLHDC2Q9Y2U9 406 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 MRPS18BQ9Y676 258 aaKnown RBP3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 CEP290O15078 2479 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 NUP210LQ5VU65 1888 aa3.16□□□□□ -1.9
SMCHD1-208ENST00000583344 HEATR5BQ9P2D3 2071 aa3.15□□□□□ -1.9
SMCHD1-208ENST00000583344 TRAV36DV7A0A075B6V5 113 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 IGLV1-36A0A0B4J1U3 117 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A0J9YY10 115 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A1B0GTH9 108 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A1W2PQD3 144 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 OR6C74A6NCV1 312 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 METTL21EPA6NDL7 271 aa3.15□□□□□ -1.91
SMCHD1-208ENST00000583344 C10orf142B7Z368 130 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms