RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 Q9N2K0 584 aa11.29□□□□□ -0.6
ITGB4-209ENST00000583327 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
ITGB4-209ENST00000583327 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
ITGB4-209ENST00000583327 MTFP1Q9UDX5 166 aa11.29□□□□□ -0.6
ITGB4-209ENST00000583327 KIF25Q9UIL4 384 aa11.29□□□□□ -0.6
ITGB4-209ENST00000583327 VPS13CQ709C8 3753 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 ODAMA1E959 279 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 LPLP06858 475 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 FCGR3AP08637 254 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 CD3GP09693 182 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 CD40LGP29965 261 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 CBX5P45973 191 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 GNG2P59768 71 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 DGCR2P98153 550 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 BTN2A1Q7KYR7 527 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 LYSMD2Q8IV50 215 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 NEK7Q8TDX7 302 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 Q96MF0 132 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 NARFLQ9H6Q4 476 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
ITGB4-209ENST00000583327 ABCA12Q86UK0 2595 aa11.28□□□□□ -0.6
ITGB4-209ENST00000583327 C22orf46C9J442 243 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 FAM157AC9JC47 383 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 LANCL1O43813 399 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 ORC5O43913 435 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 NDUFB7P17568 137 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 GZMHP20718 246 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 DLX6P56179 175 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 GNB2P62879 340 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 RPL31P62899 125 aaKnown RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 ZNF846Q147U1 533 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 BAK1Q16611 211 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 ESCO2Q56NI9 601 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 CD276Q5ZPR3 534 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 OR13A1Q8NGR1 328 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 OR4K15Q8NH41 348 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 FCAMRQ8WWV6 532 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 TRIM63Q969Q1 353 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 WDR12Q9GZL7 423 aaKnown RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 C19orf12Q9NSK7 152 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 TAS2R3Q9NYW6 316 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 OR6C3Q9NZP0 311 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 KLK11Q9UBX7 282 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 LPAR3Q9UBY5 353 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 OPN4Q9UHM6 478 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 ZNF107Q9UII5 783 aaPredicted RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
ITGB4-209ENST00000583327 LINC00312Q9Y6C7 94 aa11.27□□□□□ -0.61
ITGB4-209ENST00000583327 IGKV1D-8A0A087WSZ0 117 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 MEIKINA0A087WXM9 373 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 PPIAL4CA0A0B4J2A2 164 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 FOXH1O75593 365 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 RBBP9O75884 186 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 EDDM3BP56851 147 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 HMGN3Q15651 99 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 TRAPPC6BQ86SZ2 158 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 Q8N402 240 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 SNAPC3Q92966 411 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 TSC22D3Q99576 134 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
ITGB4-209ENST00000583327 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
ITGB4-209ENST00000583327 MGAT4AQ9UM21 535 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 POLQO75417 2590 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 AKAP9Q99996 3911 aa11.26□□□□□ -0.61
ITGB4-209ENST00000583327 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 hADV38S2A0JD32 116 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 TRAT1Q6PIZ9 186 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 MOB1BQ7L9L4 216 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 CCDC107Q8WV48 283 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 CCDC32Q9BV29 185 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 ARID1AO14497 2285 aa11.25□□□□□ -0.61
ITGB4-209ENST00000583327 NAV2Q8IVL1 2488 aa11.24□□□□□ -0.61
ITGB4-209ENST00000583327 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
ITGB4-209ENST00000583327 ANKRD20A5PA0PJZ0 165 aa11.24□□□□□ -0.61
ITGB4-209ENST00000583327 MEIS3P1A6NDR6 274 aa11.24□□□□□ -0.61
ITGB4-209ENST00000583327 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
ITGB4-209ENST00000583327 C17orf98A8MV24 154 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms