RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C13orf42A0A1B0GVH6 325 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 OR5H14A6NHG9 310 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TUBAL3A6NHL2 446 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 MLNRO43193 412 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TSC22D2O75157 780 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 SIX6O95475 246 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 SFT2D2O95562 160 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 CTSDP07339 412 aaPredicted RBP7.86□□□□□ -1.15
SS18-220ENST00000582092 IGFBP2P18065 325 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 NUP62P37198 522 aaPredicted RBP7.86□□□□□ -1.15
SS18-220ENST00000582092 CD200P41217 278 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TNFAIP6P98066 277 aaPredicted RBP7.86□□□□□ -1.15
SS18-220ENST00000582092 TFF3Q07654 80 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 BAMBIQ13145 260 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 SLC9A3R2Q15599 337 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 FBXL19-AS1Q494R0 122 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 PRAMEF6Q5VXH4 476 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 SLC38A6Q8IZM9 456 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 RELL2Q8NC24 303 aaPredicted RBP7.86□□□□□ -1.15
SS18-220ENST00000582092 NUP37Q8NFH4 326 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 OR10Z1Q8NGY1 313 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 OR10J5Q8NHC4 309 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 LRRC29Q8WV35 223 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 PIK3IP1Q96FE7 263 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 DIRC2Q96SL1 478 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 NRIP2Q9BQI9 281 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TMEM246Q9BRR3 403 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 EGLN1Q9GZT9 426 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 SLA2Q9H6Q3 261 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 DECR2Q9NUI1 292 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 TREM2Q9NZC2 230 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 JKAMPQ9P055 326 aa7.86□□□□□ -1.15
SS18-220ENST00000582092 RCC2Q9P258 522 aaKnown RBP7.86□□□□□ -1.15
SS18-220ENST00000582092 IGKV1D-8A0A087WSZ0 117 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 PIGBOS1A0A0B4J2F0 54 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 TMEM30CPA0ZSE6 113 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 LRRC30A6NM36 301 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 IFNL4K9M1U5 179 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 OR2A4O95047 310 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 GOSR1O95249 250 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 CD3EP07766 207 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 TNFRSF1AP19438 455 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 PI3P19957 117 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 GABRA2P47869 451 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 KCNJ3P48549 501 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 NKX6-1P78426 367 aaPredicted RBP7.85□□□□□ -1.15
SS18-220ENST00000582092 SORDQ00796 357 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 BSPH1Q075Z2 132 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ZNF146Q15072 292 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ACP7Q6ZNF0 438 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 Q6ZS49 121 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ZNF826PQ6ZT77 177 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 WDR86Q86TI4 376 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 LRP11Q86VZ4 500 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 LHFPL1Q86WI0 220 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 CMTM1Q8IZ96 169 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 FAM185AQ8N0U4 392 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ASCC1Q8N9N2 400 aaKnown RBP7.85□□□□□ -1.15
SS18-220ENST00000582092 OR4A4PQ8NGN8 299 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 THAP6Q8TBB0 222 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 FAM222BQ8WU58 562 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 MITD1Q8WV92 249 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 TMEM171Q8WVE6 324 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 NINJ1Q92982 152 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 MRPL24Q96A35 216 aaKnown RBP7.85□□□□□ -1.15
SS18-220ENST00000582092 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 LURAP1Q96LR2 239 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 OR2V2Q96R30 315 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 OR2A7Q96R45 310 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 SLC5A7Q9GZV3 580 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 TMEM165Q9HC07 324 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 ZNF581Q9P0T4 197 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 IL36RNQ9UBH0 155 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 SLC23A1Q9UHI7 598 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 PCDHB10Q9UN67 800 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 NPTNQ9Y639 398 aa7.85□□□□□ -1.15
SS18-220ENST00000582092 CRYBG3Q68DQ2 2970 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 FXYD6-FXYD2A0A087WZ82 144 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 TRBV6-6A0A0A6YYG2 114 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 TRAV24A0A0B4J272 114 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 A0A0B4J2A0 478 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 CEACAM18A8MTB9 384 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 L7N2F9 121 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 SLC33A1O00400 549 aaPredicted RBP7.84□□□□□ -1.15
SS18-220ENST00000582092 NAPSAO96009 420 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 PPYP01298 95 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 AADACP22760 399 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 NFYAP23511 347 aaPredicted RBP7.84□□□□□ -1.15
SS18-220ENST00000582092 IL2RGP31785 369 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 UCP3P55916 312 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 PIGPP57054 158 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 HLA-DRB3P79483 266 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 DHODHQ02127 395 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 C6orf183Q5T699 404 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 AADACL3Q5VUY0 350 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 Q6P435 159 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 WDR82Q6UXN9 313 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms