RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 OCIAD1Q9NX40 245 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 WDR90Q96KV7 1748 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 CELA2AP08217 269 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 PMCHP20382 165 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 LRRC75AQ8NAA5 344 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 GDF15Q99988 308 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 MZT1Q08AG7 82 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 PNRC1Q12796 327 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 OR2D2Q9H210 308 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 KCNIP2Q9NS61 270 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 ABCA7Q8IZY2 2146 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 PSG2P11465 335 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 RAC3P60763 192 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 BTNL3Q6UXE8 466 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 ZNF665Q9H7R5 613 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 DOK5Q9P104 306 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
TRAPPC8-207ENST00000580104 EIF4E3Q8N5X7 224 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 KIAA1456Q9P272 454 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 TRAV34A0A0B4J273 112 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 SLC10A1Q14973 349 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 FZR1Q9UM11 496 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 OR3A1P47881 315 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 IZUMO4Q1ZYL8 232 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 NAT8Q9UHE5 227 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 PSG11Q9UQ72 335 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 CCL11P51671 97 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 RND3P61587 244 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 Q3ZCU0 254 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 MUCL1Q96DR8 90 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 TWSG1Q9GZX9 223 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
TRAPPC8-207ENST00000580104 H0YIZ8 118 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 IL2RAP01589 272 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 CRYAAP02489 173 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 SCTP09683 121 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 ARL3P36405 182 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 MPDZO75970 2070 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 KIAA1324LA8MWY0 1029 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 RAMP1O60894 148 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 FCGR3BO75015 233 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 APOA2P02652 100 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 TNFSF4P23510 183 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 ACER2Q5QJU3 275 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 SPEM1Q8N4L4 309 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 CADM4Q8NFZ8 388 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 A0A1B0GTI1 187 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 E9PQ18 207 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 COL13A1Q5TAT6 717 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 WDR25Q64LD2 544 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 VAMP8Q9BV40 100 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 M0R1X1 148 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 CCL4P13236 92 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 SUMO1P63165 101 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 OR2H1Q9GZK4 316 aa11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-207ENST00000580104 ICE1Q9Y2F5 2266 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 A0A0J9YW62 118 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 PAGE4O60829 102 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 NDUFB7P17568 137 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 TPPP2P59282 170 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 NEIL1Q96FI4 390 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 S1PR3Q99500 378 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 MYOZ1Q9NP98 299 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 SIRT7Q9NRC8 400 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 CST2P09228 141 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 DANCRP0C864 163 aa11.82□□□□□ -0.52
TRAPPC8-207ENST00000580104 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms