RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 RELQ04864 619 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 GNMTQ14749 295 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 TMEM268Q5VZI3 342 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CTRB2Q6GPI1 263 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 RAB11FIP2Q7L804 512 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 LGI3Q8N145 548 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C2CD4CQ8TF44 421 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 SLAMF9Q96A28 289 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C10orf35Q96D05 121 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 HES7Q9BYE0 225 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 MAGT1Q9H0U3 335 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 DEPPQ9NTK1 212 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 PURGQ9UJV8 347 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 R4GN57 208 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 EP300Q09472 2414 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 IGHV3-64DA0A0J9YX35 117 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 PINLYPA6NC86 204 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ZNF716A6NP11 495 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 WRBO00258 174 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C1QL1O75973 258 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ACTL6BO94805 426 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 SYNGR4O95473 234 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 IGLV3-1P01715 115 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 MBPP02686 304 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FAM157CP0CG43 387 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 AGAP20933 346 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FUT3P21217 361 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 GPM6AP51674 278 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 HIST1H3AP68431 136 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 Q0VFX4 171 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C3AR1Q16581 482 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 IGSF11Q5DX21 431 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 HIST2H3PS2Q5TEC6 136 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FAM180AQ6UWF9 173 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 HIST2H3AQ71DI3 136 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CALHM1Q8IU99 346 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ZNF695Q8IW36 515 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 UBALD2Q8IYN6 164 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CCDC71LQ8N9Z2 235 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CCDC54Q8NEL0 328 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ADAMTS17Q8TE56 1095 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 EXTL1Q92935 676 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 BSCL2Q96G97 398 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 AKR1E2Q96JD6 320 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 NRIP2Q9BQI9 281 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 C20orf24Q9BUV8 137 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 BCL2L14Q9BZR8 327 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 SLC7A10Q9NS82 523 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 BOKQ9UMX3 212 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 CNOT1A5YKK6 2376 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 CACNA1DQ01668 2161 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ADAMTS9Q9P2N4 1935 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FOXI3A8MTJ6 420 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 E5RGE8 158 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ST8SIA3O43173 380 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 DEDDO75618 318 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 IGHEP01854 428 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CYC1P08574 325 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 OR8U9P0C7N5 309 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 EGR1P18146 543 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 B3GALT5-AS1P59052 145 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ZFP36L1Q07352 338 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 IL34Q6ZMJ4 242 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 TIPARPQ7Z3E1 657 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 GGNQ86UU5 652 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 ZNF100Q8IYN0 542 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 OR10Z1Q8NGY1 313 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 OR8U1Q8NH10 309 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 CD300LFQ8TDQ1 290 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 VKORC1Q9BQB6 163 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 RPS10P5Q9NQ39 176 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 FAM212BQ9NTI7 297 aaPredicted RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 SLC45A2Q9UMX9 530 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 NSG2Q9Y328 171 aa4.6□□□□□ -1.67
VAPA-203ENST00000577539 RBM7Q9Y580 266 aaKnown RBP4.6□□□□□ -1.67
VAPA-203ENST00000577539 LRRC3CA6NJW4 275 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 NTN3O00634 580 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 HSD17B6O14756 317 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TNFSF12O43508 249 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 SERPINA7P05543 415 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 DTYMKP23919 212 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FHITP49789 147 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 NHLH2Q02577 135 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 PEA15Q15121 130 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 AARDQ4LEZ3 155 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 MIDNQ504T8 468 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FOXL2NBQ6ZUU3 175 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 TUSC5Q8IXB3 177 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 STPG3Q8N7X2 389 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 OR52M1Q8NGK5 317 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 FAM213BQ8TBF2 198 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 RDH5Q92781 318 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 CPNE4Q96A23 557 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 SAT2Q96F10 170 aaPredicted RBP4.59□□□□□ -1.67
VAPA-203ENST00000577539 TXN2Q99757 166 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 STRADBQ9C0K7 418 aa4.59□□□□□ -1.67
VAPA-203ENST00000577539 PLEKHA2Q9HB19 425 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms