RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ZNF407Q9C0G0 2248 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 VSTM5A8MXK1 200 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 HSBP1L1C9JCN9 74 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 H0YIZ8 118 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 NGFP01138 241 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 CRYAAP02489 173 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 CD74P04233 296 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 FCGR3AP08637 254 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 OR8B8Q15620 311 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 DAZAP1Q96EP5 407 aaKnown RBP15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 SLC2A8Q9NY64 477 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 FUT9Q9Y231 359 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 OR3A1P47881 315 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 GNG3P63215 75 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 DOK5Q9P104 306 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 SCN8AQ9UQD0 1980 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 A0A0J9YW62 118 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 LRP5LA4QPB2 252 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 DEDDO75618 318 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 SCTP09683 121 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 PMCHP20382 165 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 TEX30Q5JUR7 227 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 PHYHD1Q5SRE7 291 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 GALMQ96C23 342 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 CTDSP1Q9GZU7 261 aa15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 TNS1Q9HBL0 1735 aaKnown RBP15.6■□□□□ 0.09
ATPAF1-214ENST00000576409 TMEM50BP56557 158 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 HIST1H3AP68431 136 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 PLPPR5Q32ZL2 321 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 SNAI3Q3KNW1 292 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 C1orf53Q5VUE5 145 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 SPSB2Q99619 263 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 LSM6P62312 80 aaKnown RBP15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 ACOT6Q3I5F7 207 aaPredicted RBP15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 CDCP2Q5VXM1 449 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 D2HGDHQ8N465 521 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 ADAMTS17Q8TE56 1095 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 MS4A10Q96PG2 267 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 PSG11Q9UQ72 335 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 SNRPCP09234 159 aaKnown RBP15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 NDUFB7P17568 137 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 ZNF92Q03936 586 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 OR2M3Q8NG83 312 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 OR10G4Q8NGN3 311 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 OR10G9Q8NGN4 311 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 OR10G7Q8NGN6 311 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 MSI2Q96DH6 328 aaKnown RBP15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 RAB40CQ96S21 281 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 RIMS4Q9H426 269 aaPredicted RBP15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 CLCF1Q9UBD9 225 aa15.59■□□□□ 0.09
ATPAF1-214ENST00000576409 ZNF658BQ4V348 819 aaPredicted RBP15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 ACER2Q5QJU3 275 aa15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 RTN4RL2Q86UN3 420 aa15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 H1FXQ92522 213 aaKnown RBP15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 BSCL2Q96G97 398 aaPredicted RBP15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 AQP10Q96PS8 301 aa15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 TIMP4Q99727 224 aa15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 GPR87Q9BY21 358 aa15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 UBE2ZQ9H832 354 aaPredicted RBP15.58■□□□□ 0.09
ATPAF1-214ENST00000576409 TGIF2-C20orf24A0A0A6YYL0 155 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 PSG2P11465 335 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 FAM3AP98173 230 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 SLC10A1Q14973 349 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 C21orf62-AS1Q17RA5 79 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 MRGPRDQ8TDS7 321 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 PRSS50Q9UI38 385 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 BDP1A6H8Y1 2624 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 FCGR3BO75015 233 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 ERVFC1-1P60608 527 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 Q3ZCU0 254 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 ACSM6Q6P461 480 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 BTNL8Q6UX41 500 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 VWCEQ96DN2 955 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 OR2D2Q9H210 308 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 DOCK11Q5JSL3 2073 aa15.58■□□□□ 0.08
ATPAF1-214ENST00000576409 TMEM14DPA8MWL7 114 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 SIGLECL1Q8N7X8 197 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 CACFD1Q9UGQ2 172 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 TCF20Q9UGU0 1960 aaKnown RBP15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 KLRC4-KLRK1H3BQV0 150 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 CDIPTO14735 213 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 ISG15P05161 165 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 PPP1CBP62140 327 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 C6orf15Q6UXA7 325 aaPredicted RBP15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 RBMXL3Q8N7X1 1067 aaKnown RBP15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 OR10AD1Q8NGE0 317 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 M0R1X1 148 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 ARL3P36405 182 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 RAC3P60763 192 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 C22orf15Q8WYQ4 148 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 ZNF331Q9NQX6 463 aaPredicted RBP15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 B3GAT1Q9P2W7 334 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 SCN5AQ14524 2016 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 COL6A6A6NMZ7 2263 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 OR5H1A6NKK0 313 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 KIAA1324LA8MWY0 1029 aaPredicted RBP15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 PGA4P0DJD7 388 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 PGA5P0DJD9 388 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 RND3P61587 244 aa15.57■□□□□ 0.08
ATPAF1-214ENST00000576409 TIGITQ495A1 244 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms