RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CCL3L1P16619 93 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 MRPS15P82914 257 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 ARL6IP1Q15041 203 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 FAM120AOSQ5T036 256 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 SAMD12Q8N8I0 201 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 SULT4A1Q9BR01 284 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 BEX2Q9BXY8 128 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 PECRQ9BY49 303 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 GAL3ST2Q9H3Q3 398 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 NCOR1P1Q9H4R4 102 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 CHMP1AQ9HD42 196 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 DIABLOQ9NR28 239 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 TMEM160Q9NX00 188 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 TRAPPC2LQ9UL33 140 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 HSF4Q9ULV5 492 aa11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 UBE2J1Q9Y385 318 aaPredicted RBP11.95□□□□□ -0.5
NPLOC4-218ENST00000574964 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 TMEM50BP56557 158 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 MOGAT2Q3SYC2 334 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 UBE2NLQ5JXB2 153 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 IL17RELQ6ZVW7 336 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 OR4K15Q8NH41 348 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 NANPQ8TBE9 248 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 SETD6Q8TBK2 473 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 DYRK2Q92630 601 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 S100A16Q96FQ6 103 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 SIRPDQ9H106 197 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 SIRT7Q9NRC8 400 aa11.94□□□□□ -0.5
NPLOC4-218ENST00000574964 NAV3Q8IVL0 2385 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 TRAV39A0A0B4J263 110 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 DPPA5A6NC42 116 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 RAB27BO00194 218 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 AVPP01185 164 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 MT-ND4P03905 459 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 CD3GP09693 182 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 PAX5Q02548 391 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 ARFRP1Q13795 201 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 VMO1Q7Z5L0 202 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 DYNC2LI1Q8TCX1 351 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 MRGPRDQ8TDS7 321 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 CORO2AQ92828 525 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 CMSS1Q9BQ75 279 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 RBM38Q9H0Z9 239 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 METTL8Q9H825 291 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 TAS2R3Q9NYW6 316 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 KCNIP1Q9NZI2 227 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 OPN4Q9UHM6 478 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 AK3Q9UIJ7 227 aa11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 TEP1Q99973 2627 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-218ENST00000574964 FOXI3A8MTJ6 420 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 FAM25AB3EWG3 89 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 FAM25CB3EWG5 89 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 FAM25GB3EWG6 89 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 RGS5O15539 181 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 GNB3P16520 340 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 GZMHP20718 246 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 TALDO1P37837 337 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 ERVFRD-1P60508 538 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 CHRFAM7AQ494W8 412 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 C6orf183Q5T699 404 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 GPR157Q5UAW9 335 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 TCF23Q7RTU1 214 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 OR13A1Q8NGR1 328 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 LHX4Q969G2 390 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 UPRTQ96BW1 309 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 SLC25A38Q96DW6 304 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 CMTM3Q96MX0 182 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 TBX15Q96SF7 602 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 ZMAT3Q9HA38 289 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 RAB9BQ9NP90 201 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
NPLOC4-218ENST00000574964 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 A0A0A6YYH2 397 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 A6NJ64 397 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 C17orf98A8MV24 154 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 HPGDSO60760 199 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 CLPXO76031 633 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 MMP9P14780 707 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 PRTN3P24158 256 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 MNDAP41218 407 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 CDNFQ49AH0 187 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 ZNF782Q6ZMW2 699 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 RTN4RL2Q86UN3 420 aa11.91□□□□□ -0.5
NPLOC4-218ENST00000574964 PDZD9Q8IXQ8 264 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms