RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 TMEM86BQ8N661 226 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ZNF491Q8N8L2 437 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR52E2Q8NGJ4 325 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR10G9Q8NGN4 311 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR9A2Q8NGT5 310 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR10R2Q8NGX6 335 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR13G1Q8NGZ3 307 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 OR51Q1Q8NH59 317 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SLC37A2Q8TED4 501 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 C12orf43Q96C57 262 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 HAUS1Q96CS2 278 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 SMIM12Q96EX1 92 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ZNF285Q96NJ3 590 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 TBX5Q99593 518 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 KIR2DL4Q99706 377 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 DCSTAMPQ9H295 470 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 TXNIPQ9H3M7 391 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 LIME1Q9H400 295 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 FBXL15Q9H469 300 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 VSIRQ9H7M9 311 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 KCNJ16Q9NPI9 418 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 TAS2R1Q9NYW7 299 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 COMMD9Q9P000 198 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 KLK13Q9UKR3 277 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 ST3GAL6Q9Y274 331 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 MRPS18CQ9Y3D5 142 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 FAM32AQ9Y421 112 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 LSM5Q9Y4Y9 91 aaKnown RBP2.63□□□□□ -1.99
NUP88-209ENST00000574855 MYH8P13535 1937 aa2.63□□□□□ -1.99
NUP88-209ENST00000574855 CDK5RAP2Q96SN8 1893 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 MYH7BA7E2Y1 1941 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PRORSD1PA6NEY8 169 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 FAM159BA6NKW6 160 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ZNF726A6NNF4 738 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 B4DXG7 233 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TRIM49D1C9J1S8 452 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 NPIPB9F8W1W9 429 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TMX2-CTNND1H3BSU7 103 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 H7C1H1 209 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 BHLHE40O14503 412 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CDX4O14627 284 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 SCRG1O75711 98 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PROSCO94903 275 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 FAM107AO95990 144 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 IGKV1D-16P01601 117 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 KLK3P07288 261 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 FCGR3AP08637 254 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PAEPP09466 180 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 C1GALT1C1LP0DN25 315 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CYBAP13498 195 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CD99P14209 185 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 GGT1P19440 569 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OMGP23515 440 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 GATA2P23769 480 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 ADORA2BP29275 332 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 S100GP29377 79 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TSPOP30536 169 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PHBP35232 272 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PPICP45877 212 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR3A4PP47883 348 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 REG1BP48304 166 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CCR6P51684 374 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 EFNA3P52797 238 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CRYBA2P53672 197 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 MFAP2P55001 183 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TAS2R43P59537 309 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CDC42P60953 191 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 NUTF2P61970 127 aaKnown RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 CYCSP99999 105 aaKnown RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 IFITM2Q01629 132 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 MXD1Q05195 221 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 PUDPQ08623 228 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 LAMTOR4Q0VGL1 99 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 FASTKQ14296 549 aaKnown RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 KCNJ11Q14654 390 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 MLF2Q15773 248 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 PRSS8Q16651 343 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 CLEC12BQ2HXU8 276 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TRMT12Q53H54 448 aaKnown RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 SYT6Q5T7P8 510 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 HIST2H3PS2Q5TEC6 136 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 KCTD16Q68DU8 428 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR10K2Q6IF99 312 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 DNAJC24Q6P3W2 148 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 TNFAIP8L2Q6P589 184 aaPredicted RBP2.62□□□□□ -1.99
NUP88-209ENST00000574855 C4orf22Q6V702 233 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 Q6ZRP5 223 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 C3orf62Q6ZUJ4 267 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 FTMTQ8N4E7 242 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR8J3Q8NGG0 315 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR1L8Q8NGR8 309 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 OR4X1Q8NH49 305 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 LHFPL5Q8TAF8 219 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ZNF519Q8TB69 540 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 ZFAND1Q8TCF1 268 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 SPPL2BQ8TCT7 592 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 SSC4DQ8WTU2 575 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 RDH5Q92781 318 aa2.62□□□□□ -1.99
NUP88-209ENST00000574855 MARC2Q969Z3 335 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms