RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 EFCAB10A6NFE3 127 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A20PA6NIJ5 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A12PA8MX19 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A5PA8MXJ8 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 LEUTXA8MZ59 168 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 GEMIN2O14893 280 aaKnown RBP13.92□□□□□ -0.18
SMG6-214ENST00000573827 HTR3BO95264 441 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A15PP0C7V4 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A13PP0C7W8 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A14PP0C7W9 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 FAM90A24PP0C7X0 464 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 GLP1RP43220 463 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 RIPK1Q13546 671 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 OSR2Q8N2R0 312 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 OR4D6Q8NGJ1 314 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 TFAP2CQ92754 450 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 ZNF184Q99676 751 aaPredicted RBP13.92□□□□□ -0.18
SMG6-214ENST00000573827 DPCDQ9BVM2 203 aaPredicted RBP13.92□□□□□ -0.18
SMG6-214ENST00000573827 MMP28Q9H239 520 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 LIN7BQ9HAP6 207 aa13.92□□□□□ -0.18
SMG6-214ENST00000573827 TRAV39A0A0B4J263 110 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 ANKRD65E5RJM6 399 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 OPN1MWP04001 364 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 CD1AP06126 327 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 OPN1MW2P0DN77 364 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 OPN1MW3P0DN78 364 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 SSTR5P35346 364 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 PPP3R1P63098 170 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 C8orf59Q8N0T1 100 aaPredicted RBP13.91□□□□□ -0.18
SMG6-214ENST00000573827 OR9G1Q8NH87 305 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 MRGPRDQ8TDS7 321 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 CYYR1Q96J86 154 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 OR14A2Q96R54 314 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 BARHL1Q9BZE3 327 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 METTL9Q9H1A3 318 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 IDI2-AS1Q9NZ38 188 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 RCC2Q9P258 522 aaKnown RBP13.91□□□□□ -0.18
SMG6-214ENST00000573827 ING4Q9UNL4 249 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 PSG11Q9UQ72 335 aa13.91□□□□□ -0.18
SMG6-214ENST00000573827 OOSP1A8MZH6 123 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 C15orf65H3BRN8 121 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 J3QR06 171 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 FBXO24O75426 580 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 OR2F2O95006 317 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 GP2P55259 537 aaKnown RBP13.9□□□□□ -0.18
SMG6-214ENST00000573827 DIAPH2-AS1Q14236 149 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 AHSA2Q719I0 299 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 LYG1Q8N1E2 194 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 NANOGP1Q8N7R0 232 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 ZNF565Q8N9K5 539 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 RFESDQ8TAC1 157 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 RBM14Q96PK6 669 aaKnown RBP13.9□□□□□ -0.18
SMG6-214ENST00000573827 DERL3Q96Q80 235 aa13.9□□□□□ -0.18
SMG6-214ENST00000573827 NKX1-2Q9UD57 310 aaPredicted RBP13.9□□□□□ -0.18
SMG6-214ENST00000573827 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 A0A1W2PPK0 400 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 OR7C1O76099 320 aaPredicted RBP13.89□□□□□ -0.19
SMG6-214ENST00000573827 IGHV3-7P01780 117 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 NFYBP25208 207 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 TCTEX1D4Q5JR98 221 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 RNLSQ5VYX0 342 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 LINC00596Q86U02 117 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 GAPTQ8N292 157 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 OR10A7Q8NGE5 316 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 CREB3L1Q96BA8 519 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 OR5M11Q96RB7 305 aa13.89□□□□□ -0.19
SMG6-214ENST00000573827 CITED2Q99967 270 aaPredicted RBP13.89□□□□□ -0.19
SMG6-214ENST00000573827 CHCHD3Q9NX63 227 aaKnown RBP13.89□□□□□ -0.19
SMG6-214ENST00000573827 TOR1AO14656 332 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 ZNF780AO75290 641 aaPredicted RBP13.88□□□□□ -0.19
SMG6-214ENST00000573827 SERPINA2P20848 420 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 BRS3P32247 399 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 PRRX1P54821 245 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 WNT4P56705 351 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 TAS2R43P59537 309 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 CD83Q01151 205 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 MED21Q13503 144 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 SLC22A6Q4U2R8 563 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 KPRPQ5T749 579 aaPredicted RBP13.88□□□□□ -0.19
SMG6-214ENST00000573827 SAMD5Q5TGI4 173 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 FAM53AQ6NSI3 398 aaPredicted RBP13.88□□□□□ -0.19
SMG6-214ENST00000573827 BPIFB6Q8NFQ5 453 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 NRG4Q8WWG1 115 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 MUL1Q969V5 352 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 SLC25A33Q9BSK2 321 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 PAK1IP1Q9NWT1 392 aaPredicted RBP13.88□□□□□ -0.19
SMG6-214ENST00000573827 LSM2Q9Y333 95 aaKnown RBP13.88□□□□□ -0.19
SMG6-214ENST00000573827 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
SMG6-214ENST00000573827 PNMA8CA0A1B0GUJ8 204 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 TMEM30CPA0ZSE6 113 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 SH2D7A6NKC9 451 aaPredicted RBP13.87□□□□□ -0.19
SMG6-214ENST00000573827 G3V4G9 280 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 MT-ND4P03905 459 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 CELP19835 753 aa13.87□□□□□ -0.19
SMG6-214ENST00000573827 CEACAM3P40198 252 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms