RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LSM2Q9Y333 95 aaKnown RBP13.89□□□□□ -0.19
SMG6-212ENST00000573153 HILPDAQ9Y5L2 63 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 FAM172BPA6NC97 362 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 ADARB2-AS1A8MUL3 147 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 PIN1P1O15428 100 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 MAPK3P27361 379 aaPredicted RBP13.88□□□□□ -0.19
SMG6-212ENST00000573153 IRF3Q14653 427 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 HERPUD1Q15011 391 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 ZNF565Q8N9K5 539 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 OR13A1Q8NGR1 328 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 MYDGFQ969H8 173 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 CREB3L1Q96BA8 519 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 MRPS24Q96EL2 167 aaKnown RBP13.88□□□□□ -0.19
SMG6-212ENST00000573153 S100A13Q99584 98 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 DPCDQ9BVM2 203 aaPredicted RBP13.88□□□□□ -0.19
SMG6-212ENST00000573153 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 DPM3Q9P2X0 92 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 KIF25Q9UIL4 384 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 ING4Q9UNL4 249 aa13.88□□□□□ -0.19
SMG6-212ENST00000573153 TET2Q6N021 2002 aaPredicted RBP13.87□□□□□ -0.19
SMG6-212ENST00000573153 NPIPB11E5RHQ5 1161 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 CSTBP04080 98 aaKnown RBP13.87□□□□□ -0.19
SMG6-212ENST00000573153 GTF2F2P13984 249 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 MYF6P23409 242 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 SLC35A2P78381 396 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 GPR50Q13585 617 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 UNQ9370/PRO34162Q6UXP9 181 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 MS4A15Q8N5U1 240 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 NKAIN3Q8N8D7 197 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 SUMF2Q8NBJ7 301 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 OR10A7Q8NGE5 316 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 KIRREL1Q96J84 757 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 DUSP21Q9H596 190 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 CALYQ9NYX4 217 aa13.87□□□□□ -0.19
SMG6-212ENST00000573153 MEIKINA0A087WXM9 373 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 PNMA8CA0A1B0GUJ8 204 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 A0A1W2PP11 408 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 OOSP1A8MZH6 123 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 GEMIN2O14893 280 aaKnown RBP13.86□□□□□ -0.19
SMG6-212ENST00000573153 IL1AP01583 271 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 BLCAPP62952 87 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 DEFA6Q01524 100 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 HLA-DRB5Q30154 266 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 TMEM95Q3KNT9 176 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 SLC16A12Q6ZSM3 486 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 OR2T6Q8NHC8 308 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 NDNFQ8TB73 568 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 UQCC2Q9BRT2 126 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 SCN3BQ9NY72 215 aa13.86□□□□□ -0.19
SMG6-212ENST00000573153 RCC2Q9P258 522 aaKnown RBP13.86□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A10PA6NDY2 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A18PA6NE21 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A16PA6NEW6 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A20PA6NIJ5 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A7PA6NKC0 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A12PA8MX19 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A5PA8MXJ8 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A23PA8MXZ1 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 LEUTXA8MZ59 168 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 H0YHG0 523 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 BUB1B-PAK6H3BSN5 160 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 HSPB6O14558 160 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 SC5DO75845 299 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 OR7C1O76099 320 aaPredicted RBP13.85□□□□□ -0.19
SMG6-212ENST00000573153 AMY1AP04745 511 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 AMY2AP04746 511 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A15PP0C7V4 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A13PP0C7W8 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A14PP0C7W9 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 FAM90A24PP0C7X0 464 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 SERPINA2P20848 420 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 GLP1RP43220 463 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 PRRX1P54821 245 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 SPHARQ15513 63 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 SLC22A6Q4U2R8 563 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 C16orf82Q7Z2V1 217 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 MUL1Q969V5 352 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 OCSTAMPQ9BR26 566 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 VCX3BQ9H321 246 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 ING3Q9NXR8 418 aa13.85□□□□□ -0.19
SMG6-212ENST00000573153 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
SMG6-212ENST00000573153 A0A1W2PPK0 400 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 PTGES3LE9PB15 166 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 F2RL2O00254 374 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 CD37P11049 281 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 CD24P25063 80 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 CEACAM3P40198 252 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 GP2P55259 537 aaKnown RBP13.84□□□□□ -0.19
SMG6-212ENST00000573153 PDLIM3Q53GG5 364 aaPredicted RBP13.84□□□□□ -0.19
SMG6-212ENST00000573153 GLIPR1L1Q6UWM5 242 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 JAGN1Q8N5M9 183 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 PHYHIPQ92561 330 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 OR5M11Q96RB7 305 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 IDI2-AS1Q9NZ38 188 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 TPRKBQ9Y3C4 175 aa13.84□□□□□ -0.19
SMG6-212ENST00000573153 TMEM30CPA0ZSE6 113 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms