RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 OTPQ5XKR4 325 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 PSMF1Q92530 271 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 FLRT3Q9NZU0 649 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TRBV7-9A0A0J9YWB2 115 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SERINC4A6NH21 518 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 LILRA1O75019 489 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 CD99P14209 185 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 LTBRP36941 435 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 IAH1Q2TAA2 248 aaPredicted RBP9.44□□□□□ -0.9
CLK3-226ENST00000569406 TMEM249Q2WGJ8 235 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TMEM176BQ3YBM2 270 aaPredicted RBP9.44□□□□□ -0.9
CLK3-226ENST00000569406 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 ZNF550Q7Z398 422 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SGPP2Q8IWX5 399 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SLC22A18ASQ8N1D0 253 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 KLHDC1Q8N7A1 406 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 CHST4Q8NCG5 386 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 NT5CQ8TCD5 201 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 KISS1RQ969F8 398 aaPredicted RBP9.44□□□□□ -0.9
CLK3-226ENST00000569406 FAM46BQ96A09 425 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 PHF7Q9BWX1 381 aaPredicted RBP9.44□□□□□ -0.9
CLK3-226ENST00000569406 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 PLEKHJ1Q9NW61 149 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TMEM242Q9NWH2 141 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 GNG13Q9P2W3 67 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 WASHC3Q9Y3C0 194 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TNFSF15O95150 251 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 ZNF136P52737 540 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PSG9Q00887 426 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 FFAR4Q5NUL3 377 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 GVQW1Q8N7I0 195 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 OR2G3Q8NGZ4 309 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PFN4Q8NHR9 129 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 DPF1Q92782 380 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 DCBLD2Q96PD2 775 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 RASL10BQ96S79 203 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 CTDSP1Q9GZU7 261 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PLK3Q9H4B4 646 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 TRAPPC1Q9Y5R8 145 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 GAGE10A6NGK3 116 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 CDC42EP2O14613 210 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 RCBTB2O95199 551 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 HSPB1P04792 205 aaKnown RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 ZNF708P17019 499 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 RPL24P83731 157 aaKnown RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 C2orf76Q3KRA6 126 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 DPY19L4Q7Z388 723 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 OR2L13Q8N349 312 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PATE1Q8WXA2 126 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 TSACCQ96A04 125 aaPredicted RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 OR2V2Q96R30 315 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 KIAA1456Q9P272 454 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 CKLFQ9UBR5 152 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PCDH15Q96QU1 1955 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 TMEM131Q92545 1883 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 HSPB2A8KAH6 182 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 ARRB1P49407 418 aaPredicted RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 SPEM2Q0P670 501 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 MGAT2Q10469 447 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 RAB30Q15771 203 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 HSPB2Q16082 182 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 ACTL10Q5JWF8 245 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 PHYHD1Q5SRE7 291 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 THSD4Q6ZMP0 1018 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 C1orf174Q8IYL3 243 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 ZNF676Q8N7Q3 588 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 TMEM204Q9BSN7 226 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 SRA1Q9HD15 236 aaKnown RBP9.43□□□□□ -0.9
CLK3-226ENST00000569406 CMC2Q9NRP2 79 aa9.43□□□□□ -0.9
CLK3-226ENST00000569406 SH2D1BO14796 132 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 ZGLP1P0C6A0 271 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 TCN2P20062 427 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 HRH1P35367 487 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 PPP1CAP62136 330 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 ZNF266Q14584 549 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 FOXN4Q96NZ1 517 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 PRSS27Q9BQR3 290 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 RAB18Q9NP72 206 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 PLA2G3Q9NZ20 509 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 TRAV8-7A0A075B6U6 113 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 A0A1B0GW64 132 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 LDB3O75112 727 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 ZNF205O95201 554 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 PFN1P07737 140 aaKnown RBP9.42□□□□□ -0.9
CLK3-226ENST00000569406 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
CLK3-226ENST00000569406 RPS4Y1P22090 263 aaKnown RBP9.42□□□□□ -0.9
CLK3-226ENST00000569406 RTP5Q14D33 572 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 GDF7Q7Z4P5 450 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 TCTEX1D1Q8N7M0 179 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 ZDHHC22Q8N966 263 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 GPR27Q9NS67 375 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 KLK13Q9UKR3 277 aa9.42□□□□□ -0.9
CLK3-226ENST00000569406 KLHDC2Q9Y2U9 406 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms