RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 C17orf78Q8N4C9 275 aa19.9■□□□□ 0.78
LINC00543-201ENST00000567234 RBMXL3Q8N7X1 1067 aaKnown RBP19.9■□□□□ 0.78
LINC00543-201ENST00000567234 DCUN1D4Q92564 292 aa19.9■□□□□ 0.78
LINC00543-201ENST00000567234 C5orf66Q9H5L9 145 aa19.9■□□□□ 0.78
LINC00543-201ENST00000567234 INTS1Q8N201 2190 aaKnown RBP19.9■□□□□ 0.78
LINC00543-201ENST00000567234 SFTA3P0C7M3 94 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 MUC1P15941 1255 aaPredicted RBP19.89■□□□□ 0.77
LINC00543-201ENST00000567234 AKR1C4P17516 323 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 MAS1LP35410 378 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 GLP1RP43220 463 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 NPY4RP50391 375 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 IDH3GP51553 393 aaPredicted RBP19.89■□□□□ 0.77
LINC00543-201ENST00000567234 AKR1C2P52895 323 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 F2RL1P55085 397 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 AKR1C1Q04828 323 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 UNQ6126/PRO20091Q6UXV3 157 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 NAXEQ8NCW5 288 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 MAFIPQ8WZ33 124 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 SEC22AQ96IW7 307 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 HDHD3Q9BSH5 251 aaPredicted RBP19.89■□□□□ 0.77
LINC00543-201ENST00000567234 OBP2BQ9NPH6 170 aa19.89■□□□□ 0.77
LINC00543-201ENST00000567234 TRAPPC2LH3BP13 241 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 SDCBPO00560 298 aaPredicted RBP19.88■□□□□ 0.77
LINC00543-201ENST00000567234 TNFSF13O75888 250 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 IGKV3-15P01624 115 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 CELA3BP08861 270 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 ZNF44P15621 663 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 BCL3P20749 454 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 PTGER4P35408 488 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 PPP1CBP62140 327 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 LRRC37A5PQ49AS3 106 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 BEX5Q5H9J7 111 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 TMEM211Q6ICI0 200 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 SLC16A13Q7RTY0 426 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 LYPD6BQ8NI32 183 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 MICU1Q9BPX6 476 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 PLK3Q9H4B4 646 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 ZNF581Q9P0T4 197 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 ATMQ13315 3056 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 IGKV1D-8A0A087WSZ0 117 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 MSTNO14793 375 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 SULT1A2P50226 295 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 RAB5CP51148 216 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 SRSF3P84103 164 aaKnown RBP19.88■□□□□ 0.77
LINC00543-201ENST00000567234 FOXF2Q12947 444 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 ATXN7L3Q14CW9 347 aaPredicted RBP19.88■□□□□ 0.77
LINC00543-201ENST00000567234 DAZAP2Q15038 168 aaPredicted RBP19.88■□□□□ 0.77
LINC00543-201ENST00000567234 P2RY6Q15077 328 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 MPV17LQ2QL34 196 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 OR2T2Q6IF00 324 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 LINC00596Q86U02 117 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 MYPOPQ86VE0 399 aaPredicted RBP19.88■□□□□ 0.77
LINC00543-201ENST00000567234 BHLHE23Q8NDY6 225 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 TMED6Q8WW62 240 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 SLAMF9Q96A28 289 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 PKIBQ9C010 78 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 DECR2Q9NUI1 292 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 PROCRQ9UNN8 238 aa19.88■□□□□ 0.77
LINC00543-201ENST00000567234 WDR1O75083 606 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 CGAP01215 116 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 RAC2P15153 192 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 VAMP1P23763 118 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 BTNL8Q6UX41 500 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 WDR31Q8NA23 367 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 EXTL1Q92935 676 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 RTBDNQ9BSG5 229 aaPredicted RBP19.87■□□□□ 0.77
LINC00543-201ENST00000567234 RNF126Q9BV68 326 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 NECAP2Q9NVZ3 263 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 MTCH1Q9NZJ7 389 aa19.87■□□□□ 0.77
LINC00543-201ENST00000567234 MED19A0JLT2 244 aaPredicted RBP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 MKRN2OSH3BPM6 223 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 OR7C1O76099 320 aaPredicted RBP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 GAPDHP04406 335 aaKnown RBP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 TUBG1P23258 451 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 CD81P60033 236 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 IL24Q13007 206 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 ZFP82Q8N141 532 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 STARD4Q96DR4 205 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 C14orf79Q96F83 325 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 OR51B6Q9H340 312 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 TUBG2Q9NRH3 451 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 TREM2Q9NZC2 230 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 CACFD1Q9UGQ2 172 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 ESPL1Q14674 2120 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 FAM157AC9JC47 383 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 LILRA1O75019 489 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 SELEP16581 610 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 UCP2P55851 309 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 SRSF7Q16629 238 aaKnown RBP eCLIP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 KRTCAP3Q53RY4 240 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 DHRS11Q6UWP2 260 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 BOLLQ8N9W6 283 aaKnown RBP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 TMEM230Q96A57 120 aa19.86■□□□□ 0.77
LINC00543-201ENST00000567234 ZNF71Q9NQZ8 489 aaPredicted RBP19.86■□□□□ 0.77
LINC00543-201ENST00000567234 SVILO95425 2214 aa19.85■□□□□ 0.77
LINC00543-201ENST00000567234 A0A1W2PR80 420 aa19.85■□□□□ 0.77
LINC00543-201ENST00000567234 AP4M1O00189 453 aa19.85■□□□□ 0.77
LINC00543-201ENST00000567234 CCSO14618 274 aa19.85■□□□□ 0.77
LINC00543-201ENST00000567234 SFT2D2O95562 160 aa19.85■□□□□ 0.77
LINC00543-201ENST00000567234 NFYBP25208 207 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms