RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 OR3A4PP47883 348 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 LMO4P61968 165 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 LOXL1Q08397 574 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-206ENST00000565990 ZNF146Q15072 292 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 MICBQ29980 383 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 Q6ZTK2 550 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-206ENST00000565990 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
SF3B3-206ENST00000565990 OR2AK2Q8NG84 335 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 OR5D18Q8NGL1 313 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 SUN5Q8TC36 379 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 TNFAIP8L1Q8WVP5 186 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 SLAMF9Q96A28 289 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 Q96MF0 132 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 CITED4Q96RK1 184 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 DPCDQ9BVM2 203 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-206ENST00000565990 KAAG1Q9UBP8 84 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 ZNF69Q9UC07 566 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 OPN4Q9UHM6 478 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 SESN1Q9Y6P5 492 aa10.54□□□□□ -0.72
SF3B3-206ENST00000565990 METTL21EPA6NDL7 271 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 TSC22D2O75157 780 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 ZNF205O95201 554 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 PLATP00750 562 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 WNT2P09544 360 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 RPA2P15927 270 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 HLA-GP17693 338 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-206ENST00000565990 S100A11P31949 105 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 CLDN12P56749 244 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 SEC61A1P61619 476 aaKnown RBP10.53□□□□□ -0.72
SF3B3-206ENST00000565990 QRFPP83859 136 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 TOR2AQ5JU69 321 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 AVPI1Q5T686 147 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 STEAP1BQ6NZ63 245 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 FAHD2BQ6P2I3 314 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-206ENST00000565990 TMEM65Q6PI78 240 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 GLIPR1L1Q6UWM5 242 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 FAM58AQ8N1B3 248 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 BEST4Q8NFU0 473 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 OR51T1Q8NGJ9 327 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 SEH1LQ96EE3 360 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 FAHD2AQ96GK7 314 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 GINS4Q9BRT9 223 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 REG4Q9BYZ8 158 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 DNTTIP1Q9H147 329 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 METTL9Q9H1A3 318 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 PCDHB16Q9NRJ7 776 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 GLS2Q9UI32 602 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
SF3B3-206ENST00000565990 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
SF3B3-206ENST00000565990 IGKV1D-17A0A075B6S4 117 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 OR2AT4A6NND4 320 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 NXPH2O95156 264 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 MPC2O95563 127 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 KNG1P01042 644 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 UBBP0CG47 229 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 PSG2P11465 335 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 GTF2F2P13984 249 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 LMO1P25800 156 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 CD80P33681 288 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 FGF12P61328 243 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 RSU1Q15404 277 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 SPIN3Q5JUX0 258 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 STUMQ69YW2 141 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 ZNF788Q6ZQV5 615 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 EIF4E3Q8N5X7 224 aaKnown RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 ZDHHC22Q8N966 263 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 BOLLQ8N9W6 283 aaKnown RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 DEFB108BQ8NET1 73 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 OR51D1Q8NGF3 324 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 MRPS24Q96EL2 167 aaKnown RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 SDSLQ96GA7 329 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 NKX3-1Q99801 234 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 PRRT1Q99946 306 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 SEC22CQ9BRL7 303 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
SF3B3-206ENST00000565990 ZNF469Q96JG9 3925 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-206ENST00000565990 TRAV18A0A075B6X5 111 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 IGHV3OR15-7A0A075B7D8 119 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 A0A0D9SG52 128 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 RFPL4AA6NLU0 287 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 CEACAM18A8MTB9 384 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 DISC1C4P0D8 188 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 F5H0A9 414 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-206ENST00000565990 RFPL4AL1F8VTS6 287 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 BET1O15155 118 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 BPNT1O95861 308 aa10.51□□□□□ -0.73
SF3B3-206ENST00000565990 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms