RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DUX4L4P0CJ87 422 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L5P0CJ88 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L6P0CJ89 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L7P0CJ90 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 SELLP14151 372 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DTYMKP23919 212 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 ATP5J2P56134 94 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM33P57088 247 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 AP3S2P59780 193 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 IL13RA1P78552 427 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 GRK1Q15835 563 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 ATPAF1Q5TC12 328 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L9Q6RFH8 374 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-205ENST00000564899 SLC36A1Q7Z2H8 476 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 MUC20Q8N307 709 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-205ENST00000564899 GVQW1Q8N7I0 195 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 FAM216BQ8N7L0 139 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 ZNRF1Q8ND25 227 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM185AQ8NFB2 350 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 PLPPR1Q8TBJ4 325 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 MED30Q96HR3 178 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 OCSTAMPQ9BR26 566 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM246Q9BRR3 403 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DNTTIP1Q9H147 329 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 RIMS4Q9H426 269 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-205ENST00000564899 BARX1Q9HBU1 254 aaPredicted RBP9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TAS2R8Q9NYW2 309 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4Q9UBX2 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 ANAPC10Q9UM13 185 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DYSFO75923 2080 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TANC2Q9HCD6 1990 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 ANKRD20A5PA0PJZ0 165 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 K7N7A8 449 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 MGST3O14880 152 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ADAM20O43506 726 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 SSX4O60224 188 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ECDO95905 644 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 NAPSAO96009 420 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 TK1P04183 234 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 CSN2P05814 226 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 GPR6P46095 362 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 PDLIM4P50479 330 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 DEFA1P59665 94 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 DEFA3P59666 94 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 KLF9Q13886 244 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 EDDM3AQ14507 147 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 KRBOX4Q5JUW0 171 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 RSBN1Q5VWQ0 802 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF497Q6ZNH5 498 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 HOGA1Q86XE5 327 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF525Q8N782 197 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 MRPL30Q8TCC3 161 aaKnown RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 MAFIPQ8WZ33 124 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 PERPQ96FX8 193 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 COQ2Q96H96 371 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 SHARPINQ9H0F6 387 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 FAM234AQ9H0X4 552 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF107Q9UII5 783 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-205ENST00000564899 TBC1D24Q9ULP9 559 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 EDARQ9UNE0 448 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 DSCAMO60469 2012 aa9.22□□□□□ -0.93
SF3B3-205ENST00000564899 CEACAM18A8MTB9 384 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF736B4DX44 427 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-205ENST00000564899 TNFRSF13BO14836 293 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-205ENST00000564899 NDUFB3O43676 98 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 MT-ND4P03905 459 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 PAX1P15863 534 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 RPS2P15880 293 aaKnown RBP9.21□□□□□ -0.94
SF3B3-205ENST00000564899 NAT1P18440 290 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 HLA-DMAP28067 261 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 P2RX3P56373 397 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 TAS2R19P59542 299 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 AESQ08117 197 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 ASAH1Q13510 395 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 DYRK1AQ13627 763 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 TMEM155Q4W5P6 130 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 SLC35E4Q6ICL7 350 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 OR52W1Q6IF63 320 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 LYPD2Q6UXB3 125 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 Q6ZPA2 131 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 GDPD3Q7L5L3 318 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 MOB1BQ7L9L4 216 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 GAPTQ8N292 157 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 SPICQ8N5J4 248 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 POC5Q8NA72 575 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 TMEM229BQ8NBD8 167 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 BEST4Q8NFU0 473 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 OR5D13Q8NGL4 314 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 CCDC107Q8WV48 283 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 SNAPC3Q92966 411 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 GSX2Q9BZM3 304 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 ZNF286AQ9HBT8 521 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 KAAG1Q9UBP8 84 aa9.21□□□□□ -0.94
SF3B3-205ENST00000564899 SLC25A10Q9UBX3 287 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-205ENST00000564899 TRAPPC2LQ9UL33 140 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms