RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CCL11P51671 97 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF273Q14593 569 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 TBC1D28Q2M2D7 210 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 IGSF11Q5DX21 431 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 LRTM2Q8N967 370 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 FDCSPQ8NFU4 85 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 LRRC20Q8TCA0 184 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 OR5P3Q8WZ94 311 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 RBM14Q96PK6 669 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF442Q9H7R0 627 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 RCC2Q9P258 522 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 CLCF1Q9UBD9 225 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 HSPB7Q9UBY9 170 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 CSAG2Q9Y5P2 127 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 MED12LQ86YW9 2145 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 SPAARA0A1B0GVQ0 90 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 TEX22C9J3V5 150 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 F8VVB4 439 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 F8VWA3 439 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 MSTNO14793 375 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 CTXN2P0C2S0 81 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF728P0DKX0 622 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 CCL2P13500 99 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 PTGER4P35408 488 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 NPBWR2P48146 333 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 GPM6AP51674 278 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 GNG3P63215 75 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 PAN3Q58A45 887 aaKnown RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 TFAP2EQ6VUC0 442 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 FBXW12Q6X9E4 464 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 C22orf34Q6ZV56 151 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 HSD17B13Q7Z5P4 300 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 SLC38A6Q8IZM9 456 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 SLC30A7Q8NEW0 376 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 STOML3Q8TAV4 291 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 MOB3AQ96BX8 217 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 CYYR1Q96J86 154 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 SUCNR1Q9BXA5 334 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 COL25A1Q9BXS0 654 aaPredicted RBP6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 REG4Q9BYZ8 158 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 PKIBQ9C010 78 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 RASL12Q9NYN1 266 aa6.2□□□□□ -1.42
HERPUD1-209ENST00000564678 OTOGLQ3ZCN5 2332 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 MFSD2BA6NFX1 497 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 ADAP1O75689 374 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 NAPSAO96009 420 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 RLN2P04090 185 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 BCL3P20749 454 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 TUBG1P23258 451 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 WNT5AP41221 380 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 PIGPP57054 158 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 IL24Q13007 206 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 IL13RA2Q14627 380 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 DAZAP2Q15038 168 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 GUSBP1Q15486 140 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 ABCA11PQ4W5N1 156 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 HIKESHIQ53FT3 197 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 Q6ZT83 130 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 MDP1Q86V88 176 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 CCDC71LQ8N9Z2 235 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 POC1AQ8NBT0 407 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 OR1S1Q8NH92 325 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 SARAFQ96BY9 339 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 OR10C1Q96KK4 312 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 DOCK7Q96N67 2140 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 AQP10Q96PS8 301 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 VKORC1Q9BQB6 163 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 WDR13Q9H1Z4 485 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 TUBG2Q9NRH3 451 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 ZFP57Q9NU63 452 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 SDHAF2Q9NX18 166 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 MTCH1Q9NZJ7 389 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF318Q5VUA4 2279 aa6.19□□□□□ -1.42
HERPUD1-209ENST00000564678 TTC28Q96AY4 2481 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 TRBV6-6A0A0A6YYG2 114 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 KIR2DS1A0A191URI9 304 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 KRBOX1C9JBD0 128 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 H0YIZ8 118 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 TAAR5O14804 337 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 CEACAM4O75871 244 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF14P17017 642 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 M6PRP20645 277 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 FCGR2CP31995 323 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 KIR2DS4P43632 304 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 UBE2NP61088 152 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 EIF5AP63241 154 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 RBM39Q14498 530 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 KIR2DS1Q14954 304 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 FAM76BQ5HYJ3 339 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 ETFRF1Q6IPR1 90 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 UNQ6126/PRO20091Q6UXV3 157 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 VASH2Q86V25 355 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 PCNPQ8WW12 178 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 RTN4IP1Q8WWV3 396 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 EXTL1Q92935 676 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 SLAMF9Q96A28 289 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms