RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-218	ENST00000563686	BTNL8	Q6UX41	500 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF645	Q8N7E2	425 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	MAFA	Q8NHW3	353 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	DDA1	Q9BW61	102 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	SH3BGRL3	Q9H299	93 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686		Q9N2K0	584 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC7A10	Q9NS82	523 aa		4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	GAR1	Q9NY12	217 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	CISD1	Q9NZ45	108 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-218	ENST00000563686	MAP1LC3B2	A6NCE7	125 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PPP5D1	E7EU14	171 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ACKR3	P25106	362 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	NHLH2	Q02577	135 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	FABP9	Q0Z7S8	132 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	GABRA6	Q16445	453 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	OR2A2	Q6IF42	318 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	SSX9	Q7RTT3	188 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	OR8U1	Q8NH10	309 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	LHX4	Q969G2	390 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	RPUSD4	Q96CM3	377 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	MAP1LC3B	Q9GZQ8	125 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	HEYL	Q9NQ87	328 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	C7orf77	A4D0Y5	90 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF205	O95201	554 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	IL3RA	P26951	378 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	SUCLG1	P53597	346 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	TMEM241	Q24JQ0	296 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	GLRX5	Q86SX6	157 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	IL22RA2	Q969J5	263 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	S1PR3	Q99500	378 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	CABLES2	Q9BTV7	478 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	SAMD10	Q9BYL1	202 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	CTDSP1	Q9GZU7	261 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	WSB1	Q9Y6I7	421 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	MT-CO3	P00414	261 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	QRFP	P83859	136 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PNRC1	Q12796	327 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PLGLA	Q15195	96 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	C3AR1	Q16581	482 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF718	Q3SXZ3	478 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	HIKESHI	Q53FT3	197 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	DHRS11	Q6UWP2	260 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	CXorf67	Q86X51	503 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	LINC00518	Q8N0U6	118 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ZBTB34	Q8NCN2	500 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10G4	Q8NGN3	311 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10G9	Q8NGN4	311 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	OR10G7	Q8NGN6	311 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	SMIM8	Q96KF7	97 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF251	Q9BRH9	671 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	RNF126	Q9BV68	326 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	FZR1	Q9UM11	496 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	DOCK3	Q8IZD9	2030 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	IGLV3-12	A0A075B6K2	115 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	FGF16	O43320	207 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PGLYRP1	O75594	196 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PTGDS	P41222	190 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	CISD2	Q8N5K1	135 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	SPOCK3	Q9BQ16	436 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	MRPL13	Q9BYD1	178 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A1W2PR80	420 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	PQLC2L	A1A4F0	135 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686		H7BYZ3	331 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	FABP4	P15090	132 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ATP6V0C	P27449	155 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	NSUN5P2	Q63ZY6	315 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	FAM166A	Q6J272	317 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF574	Q6ZN55	896 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	MDP1	Q86V88	176 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	TMEM230	Q96A57	120 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	BORCS7	Q96B45	105 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	RARRES2	Q99969	163 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	GCM1	Q9NP62	436 aa		4.95	□□□□□ -1.62
TCF4-218	ENST00000563686	TCF20	Q9UGU0	1960 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A1W2PPE2	198 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686		H3BP45	60 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SYNGR2	O43760	224 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	NPIPB7	O75200	414 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	APOA2	P02652	100 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	MGST1	P10620	155 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	NAT2	P11245	290 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ZNF708	P17019	499 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	RAB7A	P51149	207 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	CASP6	P55212	293 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	RPEL1	Q2QD12	228 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SLC16A13	Q7RTY0	426 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	BIVM	Q86UB2	503 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	CPEB3	Q8NE35	698 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	HPSE2	Q8WWQ2	592 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	SARAF	Q96BY9	339 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	ESRP2	Q9H6T0	727 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	RNF122	Q9H9V4	155 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	VAX2	Q9UIW0	290 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	TRAPPC1	Q9Y5R8	145 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686		A0A1W2PQM1	296 aa		4.94	□□□□□ -1.62
TCF4-218	ENST00000563686	CDRT15L2	A8MXV6	281 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms