RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ANKRD13BQ86YJ7 626 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF679Q8IYX0 411 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ELMOD2Q8IZ81 293 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IQCF1Q8N6M8 205 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 RTN4IP1Q8WWV3 396 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 MBOAT4Q96T53 435 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 HOPXQ9BPY8 73 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 KCTD14Q9BQ13 255 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ELOVL1Q9BW60 279 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 CCDC134Q9H6E4 229 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 GORASP2Q9H8Y8 452 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 PLEKHA3Q9HB20 300 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 EXOSC4Q9NPD3 245 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IL1RAPQ9NPH3 570 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 INTS9Q9NV88 658 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ING3Q9NXR8 418 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 OR6C3Q9NZP0 311 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 LAMP5Q9UJQ1 280 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 GSTK1Q9Y2Q3 226 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 FBXO7Q9Y3I1 522 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IGKV1-9A0A0C4DH69 117 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 CXorf65A6NEN9 183 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 LOC110117498-PIK3R3F6TDL0 507 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 SH2D1BO14796 132 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 PRODHO43272 600 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 HLA-DRB1P01911 266 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 FABP3P05413 133 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 SLC2A2P11168 524 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 BLVRBP30043 206 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 RIDAP52758 137 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 CRIP2P52943 208 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 NDPQ00604 133 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 RAB40BQ12829 278 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 PPP1R8Q12972 351 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF829Q3KNS6 432 aaPredicted RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 GTSCR1Q86UQ5 136 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 LINC00311Q8N616 119 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 YIPF7Q8N8F6 280 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 AQP11Q8NBQ7 271 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 BBS1Q8NFJ9 593 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 OR10A7Q8NGE5 316 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 OR51T1Q8NGJ9 327 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 OR10X1Q8NGY0 326 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 CASTOR1Q8WTX7 329 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 OTULINQ96BN8 352 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 FLYWCH2Q96CP2 140 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 SPACA5Q96QH8 159 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 DGCR6LQ9BY27 220 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 MROQ9BYG7 248 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 TTTY10Q9BZA0 68 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 YIPF3Q9GZM5 350 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 CHST5Q9GZS9 411 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 NCOR1P1Q9H4R4 102 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 ZCCHC4Q9H5U6 513 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 MOB1AQ9H8S9 216 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 MRGBPQ9NV56 204 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 MRM2Q9UI43 246 aaKnown RBP5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 OR52A1Q9UKL2 312 aa5.84□□□□□ -1.47
HERPUD1-206ENST00000563343 HERC1Q15751 4861 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 A0A1W2PN81 502 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 H0Y980 276 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 TNFRSF11BO00300 401 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 ARPC1BO15143 372 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 MAGEB4O15481 346 aaPredicted RBP5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 GHRHP01286 108 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 IGHV3-11P01762 117 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 ZNF44P15621 663 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 SSTR5P35346 364 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 CHRNA7P36544 502 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 GLP1RP43220 463 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 ZNF137PP52743 207 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 PAX5Q02548 391 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 CDK5R1Q15078 307 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 LTC4SQ16873 150 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 SLC35D3Q5M8T2 416 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 CGB2Q6NT52 195 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 PLEKHG7Q6ZR37 379 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 CHST4Q8NCG5 386 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 DNAAF1Q8NEP3 725 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 RFESDQ8TAC1 157 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 BORCS8Q96FH0 119 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 RHOVQ96L33 236 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 OVOL2Q9BRP0 275 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 WFDC10AQ9H1F0 79 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 PARP11Q9NR21 331 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 KIF25Q9UIL4 384 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 R4GMQ9 66 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 HSPG2P98160 4391 aa5.83□□□□□ -1.48
HERPUD1-206ENST00000563343 CCDC182A6NF36 153 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 KRT36O76013 467 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 KDM4BO94953 1096 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 CCNB2O95067 398 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 CSN3P07498 182 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 EGR2P11161 476 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 RBP2P50120 134 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 BNIP1Q12981 228 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 PDZK1IP1Q13113 114 aa5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 KLF5Q13887 457 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-206ENST00000563343 BCL2L15Q5TBC7 163 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms