RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	GEMIN2	O14893	280 aa	Known RBP	17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	GLP1R	P43220	463 aa		17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	BLCAP	P62952	87 aa		17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	LYPD6	Q86Y78	171 aa		17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	NANOGP1	Q8N7R0	232 aa		17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	CKLF	Q9UBR5	152 aa		17.46	■□□□□ 0.39
PPP4C-205	ENST00000563200	PNMA8C	A0A1B0GUJ8	204 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200		A0A1W2PP11	408 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200		A0A1W2PPK0	400 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	PIN1P1	O15428	100 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	ZNF780A	O75290	641 aa	Predicted RBP	17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	IL1A	P01583	271 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	CEL	P19835	753 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	SERPINA2	P20848	420 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	FBLN7	Q53RD9	439 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	HIST2H2BD	Q6DRA6	164 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	LINC00596	Q86U02	117 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	STX19	Q8N4C7	294 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	CREB3L1	Q96BA8	519 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	DERL3	Q96Q80	235 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	PRSS22	Q9GZN4	317 aa		17.45	■□□□□ 0.38
PPP4C-205	ENST00000563200	MYL12B	O14950	172 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	OR7C1	O76099	320 aa	Predicted RBP	17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	CSTB	P04080	98 aa	Known RBP	17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	VSIG10L2	P0DP72	767 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	NFYB	P25208	207 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	PRRX1	P54821	245 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	SLC22A6	Q4U2R8	563 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	TPTE2P1	Q5T6R2	138 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	RNLS	Q5VYX0	342 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	C11orf44	Q8N8P7	122 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	OR9G1	Q8NH87	305 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	MRGPRD	Q8TDS7	321 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	S100A13	Q99584	98 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	WNT10A	Q9GZT5	417 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	VCX	Q9H320	206 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	NOTCH3	Q9UM47	2321 aa		17.44	■□□□□ 0.38
PPP4C-205	ENST00000563200	TOR1A	O14656	332 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	CSF1	P09603	554 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	GTF2F2	P13984	249 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	CD24	P25063	80 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	CEACAM3	P40198	252 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	DEFA6	Q01524	100 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	MPV17L	Q2QL34	196 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	C16orf82	Q7Z2V1	217 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	CDH26	Q8IXH8	852 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	NRG4	Q8WWG1	115 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	MMP28	Q9H239	520 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	IDI2-AS1	Q9NZ38	188 aa		17.43	■□□□□ 0.38
PPP4C-205	ENST00000563200	OOSP1	A8MZH6	123 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	CDK1	P06493	297 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	BRS3	P32247	399 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	SSTR5	P35346	364 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	OR10A7	Q8NGE5	316 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	MUL1	Q969V5	352 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	LIN7B	Q9HAP6	207 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	PCDHB16	Q9NRJ7	776 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	PSG11	Q9UQ72	335 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	ERGIC3	Q9Y282	383 aa		17.42	■□□□□ 0.38
PPP4C-205	ENST00000563200	TRAV39	A0A0B4J263	110 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200		J3QR06	171 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	GPR176	Q14439	515 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	C6orf141	Q5SZD1	244 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	RFESD	Q8TAC1	157 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	FAM110D	Q8TAY7	271 aa	Predicted RBP	17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	LEAP2	Q969E1	77 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	OCSTAMP	Q9BR26	566 aa		17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	RCC2	Q9P258	522 aa	Known RBP	17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	MRPS28	Q9Y2Q9	187 aa	Known RBP	17.41	■□□□□ 0.38
PPP4C-205	ENST00000563200	MAS1	P04201	325 aa		17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	ARHGDIB	P52566	201 aa		17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	GLIPR1L1	Q6UWM5	242 aa		17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	SLC16A12	Q6ZSM3	486 aa		17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	JAGN1	Q8N5M9	183 aa		17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	MRPS24	Q96EL2	167 aa	Known RBP	17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	LSM2	Q9Y333	95 aa	Known RBP	17.4	■□□□□ 0.38
PPP4C-205	ENST00000563200	TMEM30CP	A0ZSE6	113 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	C15orf65	H3BRN8	121 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200		H3BUI4	141 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	OR2F2	O95006	317 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	IGHV3-7	P01780	117 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	AMY1A	P04745	511 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	AMY2A	P04746	511 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	GZMH	P20718	246 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	AQP4	P55087	323 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	RBM39	Q14498	530 aa	Known RBP	17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	TMEM95	Q3KNT9	176 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	CCDC144NL	Q6NUI1	221 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	ZNF497	Q6ZNH5	498 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	RBM14	Q96PK6	669 aa	Known RBP	17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	MND1	Q9BWT6	205 aa		17.39	■□□□□ 0.38
PPP4C-205	ENST00000563200	PLXNB1	O43157	2135 aa		17.39	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A18P	A6NE21	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A16P	A6NEW6	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A20P	A6NIJ5	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A9P	A6NNJ1	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A12P	A8MX19	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A5P	A8MXJ8	464 aa		17.38	■□□□□ 0.37
PPP4C-205	ENST00000563200	FAM90A15P	P0C7V4	464 aa		17.38	■□□□□ 0.37

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms