RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LCN12Q6JVE5 192 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 FAHD1Q6P587 224 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 SHFQ7M4L6 423 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 ERI1Q8IV48 349 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 ENTHD1Q8IYW4 607 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 DHRSXQ8N5I4 330 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 Q8N9W7 124 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 OR10X1Q8NGY0 326 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 HAVCR2Q8TDQ0 301 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 EMG1Q92979 244 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 CEP19Q96LK0 163 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 RDH12Q96NR8 316 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 INTS14Q96SY0 518 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 APOL4Q9BPW4 351 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 HSPB9Q9BQS6 159 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 PKIBQ9C010 78 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 TOLLIPQ9H0E2 274 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 GABARAPL1Q9H0R8 117 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 Q9H521 79 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 OR6C3Q9NZP0 311 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 GMPPBQ9Y5P6 360 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 WSB1Q9Y6I7 421 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 HERC1Q15751 4861 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 J3QR06 171 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 MITFO75030 526 aaPredicted RBP7.29□□□□□ -1.24
HERC1-210ENST00000560897 ALPLP05186 524 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 MPZP25189 248 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 GDNFP39905 211 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 VHLP40337 213 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 HSPA13P48723 471 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 CD81P60033 236 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 ERVK11-1P61568 191 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 IL24Q13007 206 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 KIAA0141Q14154 515 aaPredicted RBP7.29□□□□□ -1.24
HERC1-210ENST00000560897 C4orf48Q5BLP8 95 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 KRT74Q7RTS7 529 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 IZUMO1Q8IYV9 350 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 SETD9Q8NE22 299 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 OR8H1Q8NGG4 311 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 OR52N4Q8NGI2 321 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 ZNRF4Q8WWF5 429 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 Q96MT0 163 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 S1PR3Q99500 378 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
HERC1-210ENST00000560897 MRM2Q9UI43 246 aaKnown RBP7.29□□□□□ -1.24
HERC1-210ENST00000560897 ZNF107Q9UII5 783 aaPredicted RBP7.29□□□□□ -1.24
HERC1-210ENST00000560897 LOC100130705A0A1B0GUX0 176 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 PQLC2LA1A4F0 135 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 A6NHS1 94 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 HSD17B6O14756 317 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 CASQ2O14958 399 aaPredicted RBP7.28□□□□□ -1.24
HERC1-210ENST00000560897 RGS11O94810 467 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 INMTO95050 263 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 NDUFB8O95169 186 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
HERC1-210ENST00000560897 EBI3Q14213 229 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 CLVS2Q5SYC1 327 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 OGFRL1Q5TC84 451 aaPredicted RBP7.28□□□□□ -1.24
HERC1-210ENST00000560897 TMEM236Q5W0B7 351 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 ANGPTL5Q86XS5 388 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 Q8N402 240 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 IQCF1Q8N6M8 205 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 SLC37A3Q8NCC5 494 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 THEM6Q8WUY1 208 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 TRUB1Q8WWH5 349 aaKnown RBP7.28□□□□□ -1.24
HERC1-210ENST00000560897 CORO2AQ92828 525 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 TMEM106AQ96A25 262 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 SLC29A1Q99808 456 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 OR51V1Q9H2C8 321 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 SLC25A19Q9HC21 320 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 CLN6Q9NWW5 311 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 SLC2A8Q9NY64 477 aa7.28□□□□□ -1.24
HERC1-210ENST00000560897 IGHV1-3A0A0C4DH29 117 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 A0A0J9YWU9 116 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 A0A0U1RQV5 110 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 ZNF729A6NN14 1252 aaPredicted RBP7.27□□□□□ -1.25
HERC1-210ENST00000560897 G3V318 75 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 SIRPB1O00241 398 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 DLGAP1O14490 977 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 MOSP00540 346 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 IGLV1-40P01703 118 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 IGHV3-7P01780 117 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
HERC1-210ENST00000560897 LYNP07948 512 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 SPI1P17947 270 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 PPIFP30405 207 aaKnown RBP7.27□□□□□ -1.25
HERC1-210ENST00000560897 OR3A1P47881 315 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 GNG10P50151 68 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 CDK5Q00535 292 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 ZNF91Q05481 1191 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 DIAPH2-AS1Q14236 149 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 GALEQ14376 348 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 LINC00322Q6ZN03 302 aaPredicted RBP7.27□□□□□ -1.25
HERC1-210ENST00000560897 Q8IYB0 196 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 TMEM217Q8N7C4 229 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 TCEANCQ8N8B7 351 aa7.27□□□□□ -1.25
HERC1-210ENST00000560897 OR8J1Q8NGP2 316 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms