RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 FAM157CP0CG43 387 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 CEACAM1P13688 526 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 KITLGP21583 273 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 VDAC1P21796 283 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 CD200P41217 278 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 UCP2P55851 309 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 TAGLNQ01995 201 aaKnown RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 PJVKQ0ZLH3 352 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 GNMTQ14749 295 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 PHLDA2Q53GA4 152 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 IGSF11Q5DX21 431 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 FAM74A1Q5RGS3 127 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 OR2T2Q6IF00 324 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 H1FOOQ8IZA3 346 aaPredicted RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 SPAG16Q8N0X2 631 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 ZADH2Q8N4Q0 377 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 OR5D13Q8NGL4 314 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 TRIB1Q96RU8 372 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 NRIP2Q9BQI9 281 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 ADAT1Q9BUB4 502 aaKnown RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 DLL3Q9NYJ7 618 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 PRR13Q9NZ81 148 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 UBE2J1Q9Y385 318 aaPredicted RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 WIPI2Q9Y4P8 454 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 DOCK7Q96N67 2140 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 ZNF318Q5VUA4 2279 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 SPAARA0A1B0GVQ0 90 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 MBD3L4A6NDZ8 208 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 MBD3L3A6NE82 208 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 MBD3L5A6NJ08 208 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 C1QTNF9BB2RNN3 333 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 SH2D1BO14796 132 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 IGLV1-44P01699 117 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 CA6P23280 308 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 KIR2DL2P43627 348 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 IDH3GP51553 393 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 BAXQ07812 192 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 OR8G1Q15617 311 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ACSF3Q4G176 576 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 C10orf91Q5T1B1 145 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ZNF324BQ6AW86 544 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 PCSK4Q6UW60 755 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ZNF497Q6ZNH5 498 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 LYZL2Q7Z4W2 148 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 TBC1D26Q86UD7 250 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 VASH2Q86V25 355 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ZNF695Q8IW36 515 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 SCCPDHQ8NBX0 429 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ZBTB34Q8NCN2 500 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 NAXEQ8NCW5 288 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 BHLHE23Q8NDY6 225 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 OR1S2Q8NGQ3 325 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 OR1J1Q8NGS3 322 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 OR10J5Q8NHC4 309 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 MBD3L2Q8NHZ7 208 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 TMED6Q8WW62 240 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 CCDC120Q96HB5 630 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 GINS3Q9BRX5 216 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 TOLLIPQ9H0E2 274 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 TLNRD1Q9H1K6 362 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 C11orf1Q9H5F2 150 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 HES4Q9HCC6 221 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 FAM212BQ9NTI7 297 aaPredicted RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 FBXL17Q9UF56 701 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 STRAPQ9Y3F4 350 aaKnown RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 SPEF1Q9Y4P9 236 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 LSM5Q9Y4Y9 91 aaKnown RBP8.25□□□□□ -1.09
RTF1-206ENST00000560447 GPR179Q6PRD1 2367 aa8.25□□□□□ -1.09
RTF1-206ENST00000560447 ESPL1Q14674 2120 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 TMEM218A2RU14 115 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 RNF212BA8MTL3 300 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 IFNL4K9M1U5 179 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 SCTP09683 121 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 ZNF44P15621 663 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 F2RP25116 425 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 LMO1P25800 156 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 F2RL1P55085 397 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 TMEM33P57088 247 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 PMP22Q01453 160 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 PAX5Q02548 391 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 ZNF266Q14584 549 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 HERPUD1Q15011 391 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 HMGN3Q15651 99 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 NMSQ5H8A3 153 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 MBNL2Q5VZF2 373 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 RPL7L1Q6DKI1 246 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 BEND4Q6ZU67 534 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 SELENOHQ8IZQ5 122 aaKnown RBP8.24□□□□□ -1.09
RTF1-206ENST00000560447 TCTEX1D1Q8N7M0 179 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 WDR31Q8NA23 367 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 BPIFCQ8NFQ6 507 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
RTF1-206ENST00000560447 LYPD6BQ8NI32 183 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms