RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 DNASE1P24855 282 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 COL8A2P25067 703 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 HLA-DMAP28067 261 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 CDKN1AP38936 164 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 TSPAN5P62079 268 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 BTG1P62324 171 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 IFITM3Q01628 133 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 GUCA2AQ02747 115 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 ZMYND11Q15326 602 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 GRK1Q15835 563 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 CARTPTQ16568 116 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 LRRC10Q5BKY1 277 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 KRBOX4Q5JUW0 171 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 C6orf183Q5T699 404 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 OLFML2AQ68BL7 652 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 STUMQ69YW2 141 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 PLET1Q6UQ28 207 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 ZNF782Q6ZMW2 699 aaPredicted RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 ZNF497Q6ZNH5 498 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 ZNF788Q6ZQV5 615 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 DCDC5Q6ZRR9 648 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 Q6ZS49 121 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 GDPD3Q7L5L3 318 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 NLRC3Q7RTR2 1065 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 SPICQ8N5J4 248 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 CD177Q8N6Q3 437 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 ZNF565Q8N9K5 539 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 OR5AP2Q8NGF4 316 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 OR5H2Q8NGV7 314 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 SCGB3A2Q96PL1 93 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 PRRT1Q99946 306 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 DPAGT1Q9H3H5 408 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 NCOR1P1Q9H4R4 102 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 NECAP2Q9NVZ3 263 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 LPAR3Q9UBY5 353 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 MIOXQ9UGB7 285 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 ELF5Q9UKW6 265 aaPredicted RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 ANAPC10Q9UM13 185 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 PCDHB10Q9UN67 800 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 TANC2Q9HCD6 1990 aa5.38□□□□□ -1.55
SPG11-221ENST00000560299 FLNAP21333 2647 aaKnown RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 PRRC2AP48634 2157 aaKnown RBP5.38□□□□□ -1.55
SPG11-221ENST00000560299 ARID1AO14497 2285 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 MEIKINA0A087WXM9 373 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 TRDCB7Z8K6 153 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 GPR37O15354 613 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 SIGLEC5O15389 551 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 PLA2G10O15496 165 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 SPINT2O43291 252 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ADAM20O43506 726 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 NDUFB3O43676 98 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 PSPNO60542 156 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF737O75373 536 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF205O95201 554 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 NAPSAO96009 420 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 MT-ND4P03905 459 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 TK1P04183 234 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 CD74P04233 296 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 CD3DP04234 171 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 AMY2AP04746 511 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 FCER2P06734 321 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ERP29P30040 261 aaKnown RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 HRH1P35367 487 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 GLP1RP43220 463 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 GPR6P46095 362 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 CEBPDP49716 269 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 PDLIM4P50479 330 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 PAX5Q02548 391 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ATXN7L3Q14CW9 347 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 CDK10Q15131 360 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 DEFB113Q30KQ7 82 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 TMEM155Q4W5P6 130 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 FAM201AQ5SY85 155 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 C17orf107Q6ZR85 190 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF554Q86TJ5 538 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ARRDC1Q8N5I2 433 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 GVQW1Q8N7I0 195 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNRF1Q8ND25 227 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 TMEM185AQ8NFB2 350 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 OR4S1Q8NGB4 309 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 OR6F1Q8NGZ6 308 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 CHPT1Q8WUD6 406 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 CCL13Q99616 98 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 SLC25A21Q9BQT8 299 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 HRASLSQ9HDD0 168 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 Q9N2K0 584 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ING3Q9NXR8 418 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 OR6C3Q9NZP0 311 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF581Q9P0T4 197 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 KAAG1Q9UBP8 84 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 SLC25A10Q9UBX3 287 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF230Q9UIE0 474 aaPredicted RBP5.37□□□□□ -1.55
SPG11-221ENST00000560299 ANXA10Q9UJ72 324 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 ZNF222Q9UK12 451 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 TBC1D24Q9ULP9 559 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 AKAP9Q99996 3911 aa5.37□□□□□ -1.55
SPG11-221ENST00000560299 USF3Q68DE3 2245 aa5.36□□□□□ -1.55
SPG11-221ENST00000560299 TRGV10A0A0A0MS01 117 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms