RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 KRTAP10-3P60369 221 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 FGF12P61328 243 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 BTG1P62324 171 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 TNFAIP6P98066 277 aaPredicted RBP16.97■□□□□ 0.31
PSEN1-225ENST00000560005 ZMYND11Q15326 602 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 DEFB112Q30KQ8 113 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 FIP1L1Q6UN15 594 aaKnown RBP16.97■□□□□ 0.31
PSEN1-225ENST00000560005 ZDHHC16Q969W1 377 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 UPRTQ96BW1 309 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 FGF23Q9GZV9 251 aaPredicted RBP16.97■□□□□ 0.31
PSEN1-225ENST00000560005 RBFOX1Q9NWB1 397 aaKnown RBP16.97■□□□□ 0.31
PSEN1-225ENST00000560005 ST3GAL6Q9Y274 331 aa16.97■□□□□ 0.31
PSEN1-225ENST00000560005 IGKV1-12A0A0C4DH73 117 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 A0A1W2PP11 408 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 CLPSL1A2RUU4 121 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SRRM5B3KS81 715 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 PLA2G10O15496 165 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 IGKV1D-12P01611 117 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 TNFSF4P23510 183 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 CD200P41217 278 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 RBM11P57052 281 aaKnown RBP16.96■□□□□ 0.31
PSEN1-225ENST00000560005 GNG2P59768 71 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 MPV17LQ2QL34 196 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 MOGAT2Q3SYC2 334 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SCCPDHQ8NBX0 429 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 ENKURQ8TC29 256 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SLAMF9Q96A28 289 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SEH1LQ96EE3 360 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 NICN1Q9BSH3 213 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SPACA1Q9HBV2 294 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 PLEKHJ1Q9NW61 149 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 COPZ2Q9P299 210 aa16.96■□□□□ 0.31
PSEN1-225ENST00000560005 SOCS1O15524 211 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 LANCL1O43813 399 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 NOS1APO75052 506 aaPredicted RBP16.95■□□□□ 0.3
PSEN1-225ENST00000560005 NDUFA7O95182 113 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 SFTPBP07988 381 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 SRP9P49458 86 aaKnown RBP16.95■□□□□ 0.3
PSEN1-225ENST00000560005 PAX2Q02962 417 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 IL13RA2Q14627 380 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 BTNL3Q6UXE8 466 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 BRD3OSQ6XYD6 125 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 C11orf54Q9H0W9 315 aaPredicted RBP16.95■□□□□ 0.3
PSEN1-225ENST00000560005 TLNRD1Q9H1K6 362 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 MTCH1Q9NZJ7 389 aa16.95■□□□□ 0.3
PSEN1-225ENST00000560005 A0A0A6YYD4 124 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 LINC00854A0A1B0GVQ3 168 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 FAM240BA0A1B0GVZ2 78 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 ANKRD20A5PA0PJZ0 165 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 FOXI3A8MTJ6 420 aaPredicted RBP16.94■□□□□ 0.3
PSEN1-225ENST00000560005 MLNRO43193 412 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 TSPAN15O95858 294 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 GLAP06280 429 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 BCL3P20749 454 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 FUT3P21217 361 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 RCVRNP35243 200 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 TMEM50BP56557 158 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 MRPS15P82914 257 aaKnown RBP16.94■□□□□ 0.3
PSEN1-225ENST00000560005 KLF9Q13886 244 aaPredicted RBP16.94■□□□□ 0.3
PSEN1-225ENST00000560005 RNASE12Q5GAN4 147 aaKnown RBP16.94■□□□□ 0.3
PSEN1-225ENST00000560005 Q6ZR03 302 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 GDPD3Q7L5L3 318 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 FAM58AQ8N1B3 248 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 ERGIC1Q969X5 290 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 ARHGAP5-AS1Q96IT6 56 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 PECRQ9BY49 303 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 CHIAQ9BZP6 476 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 RYR3Q15413 4870 aa16.94■□□□□ 0.3
PSEN1-225ENST00000560005 TMEM235A6NFC5 223 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 CEACAM18A8MTB9 384 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 H0YL77 283 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 MFNGO00587 321 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 SYNGR1O43759 233 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 PTBP3O95758 552 aaKnown RBP16.93■□□□□ 0.3
PSEN1-225ENST00000560005 GRPP07492 148 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 GNB3P16520 340 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 GABRR1P24046 479 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 TAS2R19P59542 299 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 ARFRP1Q13795 201 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 TAF9Q16594 264 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 CCBE1Q6UXH8 406 aaPredicted RBP16.93■□□□□ 0.3
PSEN1-225ENST00000560005 TMEM229BQ8NBD8 167 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 OR2Z1Q8NG97 314 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 OR10Z1Q8NGY1 313 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
PSEN1-225ENST00000560005 PRDM13Q9H4Q3 707 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 IFT46Q9NQC8 304 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 KLK11Q9UBX7 282 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 GLS2Q9UI32 602 aa16.93■□□□□ 0.3
PSEN1-225ENST00000560005 IGHV2-70DA0A0C4DH43 119 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 MEIOCA2RUB1 952 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 F5H5P2 479 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 PDCD6O75340 191 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 WNT2P09544 360 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 AKAIN1P0CW23 69 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 PGA5P0DJD9 388 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 TNFRSF1AP19438 455 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 TBPP20226 339 aa16.92■□□□□ 0.3
PSEN1-225ENST00000560005 MDH2P40926 338 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms