RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 MEDAGQ5VYS4 303 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 ELP2Q6IA86 826 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 MOB3BQ86TA1 216 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 STPG2Q8N412 459 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 ACBD7Q8N6N7 88 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 PXT1Q8NFP0 134 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 RFESDQ8TAC1 157 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 CNIH3Q8TBE1 160 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 TFAP2CQ92754 450 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 RNF166Q96A37 237 aaPredicted RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 GABARAPL3Q9BY60 117 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 PPIL3Q9H2H8 161 aaKnown RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 FAM118AQ9NWS6 357 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 KIF25Q9UIL4 384 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 SIRT4Q9Y6E7 314 aaPredicted RBP7.24□□□□□ -1.25
HDDC3-204ENST00000559834 U3KQK5 164 aa7.24□□□□□ -1.25
HDDC3-204ENST00000559834 A0A1W2PPI3 338 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 ANKRD65E5RJM6 399 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 CCRL2O00421 344 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 HSPB6O14558 160 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 CDX1P47902 265 aaPredicted RBP7.23□□□□□ -1.25
HDDC3-204ENST00000559834 GNG10P50151 68 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 RASSF2P50749 326 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 ZP1P60852 638 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 PAX5Q02548 391 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 MRPL28Q13084 256 aaKnown RBP7.23□□□□□ -1.25
HDDC3-204ENST00000559834 EBI3Q14213 229 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 IL13RA2Q14627 380 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 KIR2DS1Q14954 304 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 LTC4SQ16873 150 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 UTF1Q5T230 341 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF691Q5VV52 312 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 C18orf65Q6ZTR6 163 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 TGIF2LXQ8IUE1 241 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 C10orf67Q8IYJ2 551 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 PARP16Q8N5Y8 322 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR51A4Q8NGJ6 313 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR5M8Q8NGP6 311 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR13A1Q8NGR1 328 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR2T10Q8NGZ9 312 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR10AC1Q8NH08 325 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 OR8U1Q8NH10 309 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 MRGPRDQ8TDS7 321 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 LEAP2Q969E1 77 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 RNFT2Q96EX2 444 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 PELI1Q96FA3 418 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 CENPNQ96H22 339 aaPredicted RBP7.23□□□□□ -1.25
HDDC3-204ENST00000559834 C4orf36Q96KX1 117 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 GPER1Q99527 375 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 DCLRE1BQ9H816 532 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 LINC00527Q9UJ94 153 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 ORC6Q9Y5N6 252 aa7.23□□□□□ -1.25
HDDC3-204ENST00000559834 TRAV24A0A0B4J272 114 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 IGHV1-3A0A0C4DH29 117 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 TMEM212A6NML5 194 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 J3QRE1 110 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 HSD17B6O14756 317 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 ELANEP08246 267 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 RAB3AP20336 220 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 IL3RAP26951 378 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 SNRPGP62308 76 aaKnown RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 ZNF816Q0VGE8 651 aaPredicted RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 FOXE3Q13461 319 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 GPR50Q13585 617 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 DIAPH2-AS1Q14236 149 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 GALEQ14376 348 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 RSU1Q15404 277 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 C1orf146Q5VVC0 180 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 LCNL1Q6ZST4 164 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 SATL1Q86VE3 508 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 SYS1Q8N2H4 156 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 OR8H1Q8NGG4 311 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 OR5AK2Q8NH90 309 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 TNFAIP8L1Q8WVP5 186 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 RAX2Q96IS3 184 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 EAF1Q96JC9 268 aaPredicted RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 RASL11BQ9BPW5 248 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 ABCG5Q9H222 651 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 LIN7CQ9NUP9 197 aaKnown RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 CHCHD3Q9NX63 227 aaKnown RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 OAZ3Q9UMX2 235 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 DHDHQ9UQ10 334 aa7.22□□□□□ -1.25
HDDC3-204ENST00000559834 EXOGQ9Y2C4 368 aaKnown RBP7.22□□□□□ -1.25
HDDC3-204ENST00000559834 LINC01548A6NM66 108 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 C3orf84H3BNL1 204 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 HTR3BO95264 441 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 FADS2O95864 444 aaKnown RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 MOSP00540 346 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 CSTBP04080 98 aaKnown RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 RPLP1P05386 114 aaKnown RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 CD1BP29016 333 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 ECI1P42126 302 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 GPR12P47775 334 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 GBX2P52951 348 aaPredicted RBP7.21□□□□□ -1.26
HDDC3-204ENST00000559834 LHFPL3Q86UP9 236 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 IZUMO1Q8IYV9 350 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 C8orf31Q8N9H6 132 aa7.21□□□□□ -1.26
HDDC3-204ENST00000559834 Q8NFD4 153 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms