RNA–Protein interactions for RNA: ENST00000559522.1

PIF1-206, Transcript of PIF1 5'-to-3' DNA helicase, human

TSL 3

Gene PIF1, Length 650 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIF1-206	ENST00000559522	ZFP57	Q9NU63	452 aa		11.21	□□□□□ -0.61
PIF1-206	ENST00000559522	FAM118A	Q9NWS6	357 aa		11.21	□□□□□ -0.61
PIF1-206	ENST00000559522	TRAV24	A0A0B4J272	114 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A18P	A6NE21	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A16P	A6NEW6	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A20P	A6NIJ5	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	LINC01548	A6NM66	108 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A9P	A6NNJ1	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A12P	A8MX19	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A5P	A8MXJ8	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522		E9PI62	339 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	IL1A	P01583	271 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	GAPDH	P04406	335 aa	Known RBP	11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A15P	P0C7V4	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A13P	P0C7W8	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A14P	P0C7W9	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM90A24P	P0C7X0	464 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	CGB3	P0DN86	165 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	CGB7	P0DN87	165 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	ZP1	P60852	638 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	SNRPG	P62308	76 aa	Known RBP	11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	EGFEM1P	Q0D2K5	195 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	GALE	Q14376	348 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	PIGY	Q3MUY2	71 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	ETV3L	Q6ZN32	361 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	OR51T1	Q8NGJ9	327 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	UBALD1	Q8TB05	177 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	PLPPR1	Q8TBJ4	325 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	CCDC107	Q8WV48	283 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	AMBN	Q9NP70	447 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	EXOG	Q9Y2C4	368 aa	Known RBP	11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	GMPPB	Q9Y5P6	360 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522	KIAA2026	Q5HYC2	2103 aa		11.2	□□□□□ -0.62
PIF1-206	ENST00000559522		A0A1W2PPI3	338 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	TMEM212	A6NML5	194 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522		J3QRE1	110 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	CCRL2	O00421	344 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	EI24	O14681	340 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	ZFPL1	O95159	310 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	CDRT1	O95170	752 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	SSTR5	P35346	364 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	DGCR2	P98153	550 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	ATAD3C	Q5T2N8	411 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	ZNF695	Q8IW36	515 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	OR8H3	Q8N146	312 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	NEK7	Q8TDX7	302 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	WWC2-AS2	Q96NR7	200 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	B9D2	Q9BPU9	175 aa		11.19	□□□□□ -0.62
PIF1-206	ENST00000559522	CCL24	O00175	119 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	GABRP	O00591	440 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	HSD17B6	O14756	317 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ATP5H	O75947	161 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	FADS2	O95864	444 aa	Known RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	CSTB	P04080	98 aa	Known RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	GZMH	P20718	246 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	SLC25A30	Q5SVS4	291 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ELP2	Q6IA86	826 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	LCNL1	Q6ZST4	164 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	STPG2	Q8N412	459 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	PARP16	Q8N5Y8	322 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	SUMF2	Q8NBJ7	301 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	PXT1	Q8NFP0	134 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	OR51A2	Q8NGJ7	313 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ARL11	Q969Q4	196 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	CPNE2	Q96FN4	548 aa	Predicted RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	S100A13	Q99584	98 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	DPCD	Q9BVM2	203 aa	Predicted RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	METTL9	Q9H1A3	318 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	TAS2R4	Q9NYW5	299 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ZNF581	Q9P0T4	197 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ZMAT5	Q9UDW3	170 aa	Known RBP	11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	ST3GAL6	Q9Y274	331 aa		11.18	□□□□□ -0.62
PIF1-206	ENST00000559522	IGHV3-43	A0A0B4J1X8	118 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	IGHV1-3	A0A0C4DH29	117 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	SDCBP	O00560	298 aa	Predicted RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	FGF16	O43320	207 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	OR7C1	O76099	320 aa	Predicted RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	ALPL	P05186	524 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	RPLP1	P05386	114 aa	Known RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	IGHV3-43D	P0DP04	118 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	GTF2A1	P52655	376 aa	Predicted RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	PNLIPRP3	Q17RR3	467 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	TEX38	Q6PEX7	206 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	COMMD1	Q8N668	190 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	EAF1	Q96JC9	268 aa	Predicted RBP	11.17	□□□□□ -0.62
PIF1-206	ENST00000559522		Q96MT0	163 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	RASL11B	Q9BPW5	248 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	ERVK13-1	Q9NX77	482 aa		11.17	□□□□□ -0.62
PIF1-206	ENST00000559522	NPIPB11	E5RHQ5	1161 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	MPZL2	O60487	215 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	IGHG2	P01859	326 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	SERPINA2	P20848	420 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	ECI1	P42126	302 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	DCTN2	Q13561	401 aa	Known RBP	11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	IL13RA2	Q14627	380 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	DEFB136	Q30KP8	78 aa		11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.16	□□□□□ -0.62
PIF1-206	ENST00000559522	SLC16A12	Q6ZSM3	486 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms