RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 DEFB108AA8MXU0 73 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 CELA3AP09093 270 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 P2RY1P47900 373 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 SLC25A53Q5H9E4 307 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 FADS6Q8N9I5 356 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ADAMTS17Q8TE56 1095 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM54Q969K7 222 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 PARP11Q9NR21 331 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 K7ESF4 209 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 SPINK9Q5DT21 86 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 DHRS11Q6UWP2 260 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 CLEC18AA5D8T8 446 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 RNF212BA8MTL3 300 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 VDAC1P21796 283 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 ERVK-16P61578 105 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 SUPT4H1P63272 117 aaKnown RBP13.37□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF429Q86V71 674 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 CLEC18CQ8NCF0 446 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 NUDT16L1Q9BRJ7 211 aaKnown RBP13.37□□□□□ -0.27
AP4E1-202ENST00000558439 RIMS4Q9H426 269 aaPredicted RBP13.37□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF727A8MUV8 499 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 ADGRG7Q96K78 797 aa13.37□□□□□ -0.27
AP4E1-202ENST00000558439 TRDCB7Z8K6 153 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 CYB5BO43169 146 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 UBE2L5PA0A1B0GUS4 154 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 NAT2P11245 290 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 PPP1CCP36873 323 aaKnown RBP13.36□□□□□ -0.27
AP4E1-202ENST00000558439 QRFPP83859 136 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 NTNG2Q96CW9 530 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 HEYLQ9NQ87 328 aaPredicted RBP13.36□□□□□ -0.27
AP4E1-202ENST00000558439 RCC2Q9P258 522 aaKnown RBP13.36□□□□□ -0.27
AP4E1-202ENST00000558439 V9GYS6 101 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 IGHV3-43A0A0B4J1X8 118 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 PRSS44E7EML9 344 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 RPL36A-HNRNPH2H7BZ11 118 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 IGHV3-43DP0DP04 118 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 PDLIM3Q53GG5 364 aaPredicted RBP13.36□□□□□ -0.27
AP4E1-202ENST00000558439 C5orf24Q7Z6I8 188 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 DEFB108BQ8NET1 73 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 OR1K1Q8NGR3 316 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 TP53RKQ96S44 253 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 GAB2Q9UQC2 676 aa13.36□□□□□ -0.27
AP4E1-202ENST00000558439 KCNMB1Q16558 191 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 PPP1R32Q7Z5V6 425 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 RBFOX3A6NFN3 312 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 DNPH1O43598 174 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 SOX15O60248 233 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 MT-CO3P00414 261 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 MT-ND4LP03901 98 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 HLA-GP17693 338 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 TCEAL7Q9BRU2 100 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 IL36RNQ9UBH0 155 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 DOCK10Q96BY6 2186 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF98A6NK75 572 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 SEC11BP0C7V7 166 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 RBMS3Q6XE24 437 aaKnown RBP13.35□□□□□ -0.27
AP4E1-202ENST00000558439 PPP1R35Q8TAP8 253 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 WIPF3A6NGB9 483 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 SYNGR3O43761 229 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 KLF7O75840 302 aaPredicted RBP13.35□□□□□ -0.27
AP4E1-202ENST00000558439 PSG2P11465 335 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM187Q14656 261 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 MPV17LQ2QL34 196 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 DCAF10Q5QP82 559 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 COMMD1Q8N668 190 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM252Q8N6L7 170 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 ZPBPQ9BS86 351 aa13.35□□□□□ -0.27
AP4E1-202ENST00000558439 PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
AP4E1-202ENST00000558439 BMP5P22003 454 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 OR3A1P47881 315 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 COL19A1Q14993 1142 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 NCMAPQ5T1S8 102 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 FBLN5Q9UBX5 448 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 PCNX1Q96RV3 2341 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 SHISA7A6NL88 538 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 SULT1A1P50225 295 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 EIF4E3Q8N5X7 224 aaKnown RBP13.34□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM251Q8N6I4 163 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 ZIC4Q8N9L1 334 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
AP4E1-202ENST00000558439 HSF4Q9ULV5 492 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
AP4E1-202ENST00000558439 ACACAQ13085 2346 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
AP4E1-202ENST00000558439 LINC01387J3KSC0 135 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 PPP1R2P9O14990 202 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 MOB3AQ96BX8 217 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 TM2D1Q9BX74 207 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 TTTY12Q9BZ98 90 aa13.34□□□□□ -0.27
AP4E1-202ENST00000558439 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
AP4E1-202ENST00000558439 CDS2O95674 445 aa13.33□□□□□ -0.27
AP4E1-202ENST00000558439 GAPDHP04406 335 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms