RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DUX4L5P0CJ88 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L6P0CJ89 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L7P0CJ90 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 SELLP14151 372 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 NDUFB7P17568 137 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 P2RX3P56373 397 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 EDDM3BP56851 147 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 TAS2R46P59540 309 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 ASAH1Q13510 395 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 ZNF880Q6PDB4 577 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 TRAT1Q6PIZ9 186 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4L9Q6RFH8 374 aaPredicted RBP14.03□□□□□ -0.16
SNX1-203ENST00000558040 Q6ZS49 121 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 OR4K15Q8NH41 348 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 NINJ1Q92982 152 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 NEIL1Q96FI4 390 aaPredicted RBP14.03□□□□□ -0.16
SNX1-203ENST00000558040 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 DUX4Q9UBX2 424 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 KIF25Q9UIL4 384 aa14.03□□□□□ -0.16
SNX1-203ENST00000558040 TENM4Q6N022 2769 aa14.02□□□□□ -0.16
SNX1-203ENST00000558040 HELZ2Q9BYK8 2649 aaKnown RBP14.02□□□□□ -0.16
SNX1-203ENST00000558040 ODAMA1E959 279 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 NAP1L6A6NFF2 107 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 DVL1O14640 695 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 GPR37O15354 613 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 HLA-DMAP28067 261 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 GLIPR1P48060 266 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 ARPC4P59998 168 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 MEF2DQ14814 521 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 DEFB113Q30KQ7 82 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 CHRFAM7AQ494W8 412 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
SNX1-203ENST00000558040 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 OR52W1Q6IF63 320 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 STEAP1BQ6NZ63 245 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 MZT2BQ6NZ67 158 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 LRRC75A-AS1Q8N1F1 130 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 POC5Q8NA72 575 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 OR5H2Q8NGV7 314 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 MAFIPQ8WZ33 124 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 SNAPC3Q92966 411 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 MBNL3Q9NUK0 354 aaKnown RBP14.02□□□□□ -0.17
SNX1-203ENST00000558040 OR6C3Q9NZP0 311 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 CTSZQ9UBR2 303 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 LPAR3Q9UBY5 353 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 ANXA10Q9UJ72 324 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 TBC1D24Q9ULP9 559 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 USF3Q68DE3 2245 aa14.02□□□□□ -0.17
SNX1-203ENST00000558040 TRDCB7Z8K6 153 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 LYRM1O43325 122 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 RAB3DO95716 219 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 CD74P04233 296 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 CD3DP04234 171 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 OR3A3P47888 321 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 NPY4RP50391 375 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 HLA-DRB3P79483 266 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 RGS21Q2M5E4 152 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 ZNF554Q86TJ5 538 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 OR5AP2Q8NGF4 316 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 C10orf105Q8TEF2 133 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 CCDC107Q8WV48 283 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 MBD6Q96DN6 1003 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 BPESC1Q9GZL8 116 aa14.01□□□□□ -0.17
SNX1-203ENST00000558040 PATZ1Q9HBE1 687 aaKnown RBP14.01□□□□□ -0.17
SNX1-203ENST00000558040 PLA2G10O15496 165 aa14□□□□□ -0.17
SNX1-203ENST00000558040 WNT2P09544 360 aa14□□□□□ -0.17
SNX1-203ENST00000558040 HRH1P35367 487 aa14□□□□□ -0.17
SNX1-203ENST00000558040 GLP1RP43220 463 aa14□□□□□ -0.17
SNX1-203ENST00000558040 MEF2CQ06413 473 aaPredicted RBP14□□□□□ -0.17
SNX1-203ENST00000558040 Q6ZPA2 131 aa14□□□□□ -0.17
SNX1-203ENST00000558040 TPRX1Q8N7U7 411 aa14□□□□□ -0.17
SNX1-203ENST00000558040 ZNF565Q8N9K5 539 aa14□□□□□ -0.17
SNX1-203ENST00000558040 HRASLSQ9HDD0 168 aa14□□□□□ -0.17
SNX1-203ENST00000558040 RAB9BQ9NP90 201 aa14□□□□□ -0.17
SNX1-203ENST00000558040 NECAP2Q9NVZ3 263 aa14□□□□□ -0.17
SNX1-203ENST00000558040 MCUBQ9NWR8 336 aa14□□□□□ -0.17
SNX1-203ENST00000558040 CLN8Q9UBY8 286 aa14□□□□□ -0.17
SNX1-203ENST00000558040 TRGV10A0A0A0MS01 117 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 TRBV23-1A0A0A0MS06 115 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 hADV38S2A0JD32 116 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 DISC1C4P0D8 188 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 F5H0A9 414 aaPredicted RBP13.99□□□□□ -0.17
SNX1-203ENST00000558040 FABP7O15540 132 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 IFNA6P05013 189 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 CTXN2P0C2S0 81 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 RCC1P18754 421 aaPredicted RBP13.99□□□□□ -0.17
SNX1-203ENST00000558040 GZMHP20718 246 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 CDK10Q15131 360 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 VAX1Q5SQQ9 334 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 OR4C16Q8NGL9 310 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 OR4A4PQ8NGN8 299 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 MRGPRDQ8TDS7 321 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 H1FXQ92522 213 aaKnown RBP13.99□□□□□ -0.17
SNX1-203ENST00000558040 RAB39BQ96DA2 213 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 LURAP1Q96LR2 239 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 C11orf54Q9H0W9 315 aaPredicted RBP13.99□□□□□ -0.17
SNX1-203ENST00000558040 NARFLQ9H6Q4 476 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 OPN4Q9UHM6 478 aa13.99□□□□□ -0.17
SNX1-203ENST00000558040 IGKV1D-8A0A087WSZ0 117 aa13.98□□□□□ -0.17
SNX1-203ENST00000558040 M0QYG6 137 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms