RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 C10orf99Q6UWK7 81 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 THNSL2Q86YJ6 484 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 MRGPRDQ8TDS7 321 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 LINC00574Q9H8X3 128 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 AURKAIP1Q9NWT8 199 aaPredicted RBP17.98■□□□□ 0.47
ACTN1-220ENST00000556433 PSG11Q9UQ72 335 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A18PA6NE21 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A16PA6NEW6 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A20PA6NIJ5 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A9PA6NNJ1 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A12PA8MX19 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A5PA8MXJ8 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 NPIPB11E5RHQ5 1161 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 CDRT1O95170 752 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 PF4P02776 101 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 SNRNP70P08621 437 aaKnown RBP17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A15PP0C7V4 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A13PP0C7W8 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A14PP0C7W9 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 FAM90A24PP0C7X0 464 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 KCNJ3P48549 501 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 CCDC58Q4VC31 144 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 XAF1Q6GPH4 301 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 DRAM1Q8N682 238 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 ZNF555Q8NEP9 628 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 DPCDQ9BVM2 203 aaPredicted RBP17.97■□□□□ 0.47
ACTN1-220ENST00000556433 MOB4Q9Y3A3 225 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 HSPE1-MOB4S4R3N1 261 aa17.97■□□□□ 0.47
ACTN1-220ENST00000556433 TRAV39A0A0B4J263 110 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 WBP4O75554 376 aaKnown RBP17.96■□□□□ 0.47
ACTN1-220ENST00000556433 BAG2O95816 211 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 ETV1P50549 477 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 PAX5Q02548 391 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 MADCAM1Q13477 382 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 KHDC1LQ5JSQ8 128 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 TMPRSS11AQ6ZMR5 421 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 SUMF2Q8NBJ7 301 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 OR56B4Q8NH76 319 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 TMEM106AQ96A25 262 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 METTL9Q9H1A3 318 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 TMEM138Q9NPI0 162 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 ZNF581Q9P0T4 197 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 ST3GAL6Q9Y274 331 aa17.96■□□□□ 0.47
ACTN1-220ENST00000556433 DCKP27707 260 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 SSTR5P35346 364 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 GNG10P50151 68 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 PPP3R1P63098 170 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 DIAPH2-AS1Q14236 149 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 HES1Q14469 280 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 OR2G6Q5TZ20 316 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 OSR2Q8N2R0 312 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 OR10A7Q8NGE5 316 aa17.95■□□□□ 0.46
ACTN1-220ENST00000556433 SIRT4Q9Y6E7 314 aaPredicted RBP17.95■□□□□ 0.46
ACTN1-220ENST00000556433 A0A1W2PPI3 338 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 OR7C1O76099 320 aaPredicted RBP17.94■□□□□ 0.46
ACTN1-220ENST00000556433 CSTBP04080 98 aaKnown RBP17.94■□□□□ 0.46
ACTN1-220ENST00000556433 ZNF93P35789 620 aaPredicted RBP17.94■□□□□ 0.46
ACTN1-220ENST00000556433 RAB7AP51149 207 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 HNF4GQ14541 408 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 DDI2Q5TDH0 399 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 SLC16A12Q6ZSM3 486 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 OR10X1Q8NGY0 326 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 OR52N1Q8NH53 320 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 S100A13Q99584 98 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 BABAM2Q9NXR7 383 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 SMPD3Q9NY59 655 aaPredicted RBP17.94■□□□□ 0.46
ACTN1-220ENST00000556433 IL36GQ9NZH8 169 aa17.94■□□□□ 0.46
ACTN1-220ENST00000556433 A0A1W2PPE3 182 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 PSMB11A5LHX3 300 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 OGG1O15527 345 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 TMEM11P17152 192 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 GZMHP20718 246 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 BDKRB2P30411 391 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 OR8H3Q8N146 312 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 ORAI1Q96D31 301 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 IFT22Q9H7X7 185 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 ZNF281Q9Y2X9 895 aa17.93■□□□□ 0.46
ACTN1-220ENST00000556433 IRGMA1A4Y4 181 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 GEMIN2O14893 280 aaKnown RBP17.92■□□□□ 0.46
ACTN1-220ENST00000556433 CLIC3O95833 236 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 SERPINA2P20848 420 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 RBM11P57052 281 aaKnown RBP17.92■□□□□ 0.46
ACTN1-220ENST00000556433 SLC35A2P78381 396 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 NHLRC3Q5JS37 347 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 ZNF329Q86UD4 541 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 RDH12Q96NR8 316 aa17.92■□□□□ 0.46
ACTN1-220ENST00000556433 PAK1IP1Q9NWT1 392 aaPredicted RBP17.92■□□□□ 0.46
ACTN1-220ENST00000556433 DNAH3Q8TD57 4116 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 TMEM30CPA0ZSE6 113 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 MPIG6BO95866 241 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 MYL12AP19105 171 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 ATAD3CQ5T2N8 411 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 C5orf56Q8N8D9 126 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 OR13C5Q8NGS8 318 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 ARL11Q969Q4 196 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 SMIM19Q96E16 107 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 RCC1LQ96I51 464 aaKnown RBP17.91■□□□□ 0.46
ACTN1-220ENST00000556433 CLEC2DQ9UHP7 191 aa17.91■□□□□ 0.46
ACTN1-220ENST00000556433 ZNF780AO75290 641 aaPredicted RBP17.9■□□□□ 0.46
ACTN1-220ENST00000556433 LALBAP00709 142 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms