RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 MDKP21741 143 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 HLA-BQ31612 363 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 MS4A10Q96PG2 267 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 RBPJQ06330 500 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 IL11RAQ14626 422 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF880Q6PDB4 577 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 Q8IYB0 196 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 SHISA5Q8N114 240 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 MRGPRFQ96AM1 343 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.31
ARHGEF40-207ENST00000556399 DVL1O14640 695 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 KRTDAPP60985 99 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 HSF4Q9ULV5 492 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 NAT2P11245 290 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 SPINK9Q5DT21 86 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM147Q9BVK8 224 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 FGF16O43320 207 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 HSPB1P04792 205 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 HLA-GP17693 338 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 RND3P61587 244 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 SLC10A1Q14973 349 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
ARHGEF40-207ENST00000556399 A0A1B0GU03 582 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 DUXBA0A1W2PPF3 345 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 TRAF3IP2O43734 574 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR7C2O60412 319 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 BCL2P10415 239 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 DPPA3Q6W0C5 159 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 C1QL2Q7Z5L3 287 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 H1FOOQ8IZA3 346 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 ABHD5Q8WTS1 349 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 Q96M66 194 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR2D2Q9H210 308 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 SOX15O60248 233 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 PSG2P11465 335 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 RPL29P47914 159 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM187Q14656 261 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 BIVMQ86UB2 503 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 MOB3AQ96BX8 217 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 PLPPR2Q96GM1 343 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 TMEM9BQ9NQ34 198 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 CBY1Q9Y3M2 126 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR2W1Q9Y3N9 320 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 C20orf202A1L168 122 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 NPIPB13A6NJU9 1138 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 NPIPB4C9JG80 1138 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 F8VVB4 439 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 F8VWA3 439 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 H0YIZ8 118 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 ZNF92Q03936 586 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 CXorf67Q86X51 503 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 EDARADDQ8WWZ3 215 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 SLC35D1Q9NTN3 355 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 DOK5Q9P104 306 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 RP1P56715 2156 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 TGIF2-C20orf24A0A0A6YYL0 155 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 A0A1W2PR80 420 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 HEXAP06865 529 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 LIFP15018 202 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 ACER2Q5QJU3 275 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 CORO2AQ92828 525 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 S1PR3Q99500 378 aa13.07□□□□□ -0.32
ARHGEF40-207ENST00000556399 MEX3AA1L020 520 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 MMP7P09237 267 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 ERVFC1-1P60608 527 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 PLGLAQ15195 96 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 ATP6V1FQ16864 119 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 SNAI3Q3KNW1 292 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 MUCL1Q96DR8 90 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 VAMP8Q9BV40 100 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 GSN-AS1Q9NRJ2 163 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 OCIAD1Q9NX40 245 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 FUT9Q9Y231 359 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR5B21A6NL26 309 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 CD81P60033 236 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 OR1K1Q8NGR3 316 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 TWSG1Q9GZX9 223 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 LINC01387J3KSC0 135 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 B2MP61769 119 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 RSG1Q9BU20 258 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 GPR35Q9HC97 309 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 MANBALQ9NQG1 85 aa13.06□□□□□ -0.32
ARHGEF40-207ENST00000556399 LOXL2Q9Y4K0 774 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms