RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SDCBPO00560 298 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RER1O15258 196 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 BCAT2O15382 392 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 YKT6O15498 198 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DNPH1O43598 174 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DEDDO75618 318 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR2J2O76002 312 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DIRAS3O95661 229 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ACTL6AO96019 429 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 HEXAP06865 529 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 IL6RP08887 468 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 NPSP0C0P6 89 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF883P0CG24 379 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SMIM6P0DI80 62 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR5H8P0DN80 308 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 CD79AP11912 226 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ICAM2P13598 275 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 MUC1P15941 1255 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 PAX6P26367 422 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DUSP1P28562 367 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 CDAP32320 146 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 CD80P33681 288 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 PTGER4P35408 488 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ALDH3B1P43353 468 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ARHGDIBP52566 201 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DVL1P1P54792 670 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 DSCR4P56555 118 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 PCBD1P61457 104 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 FAM3AP98173 230 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 MFAP5Q13361 173 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 IL13RA2Q14627 380 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RHEBQ15382 184 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SHBQ15464 509 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR8B8Q15620 311 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF239Q16600 458 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 GUCA2BQ16661 112 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ANKRD55Q3KP44 614 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM176BQ3YBM2 270 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 C10orf128Q5T292 105 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 GPR157Q5UAW9 335 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RPL7L1Q6DKI1 246 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 HIST2H2BCQ6DN03 193 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SLC22A25Q6T423 547 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 FBXW12Q6X9E4 464 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF66Q6ZN08 573 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 C16orf47Q6ZP98 133 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 FAM185AQ8N0U4 392 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 GPR137CQ8N3F9 429 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 BMPERQ8N8U9 685 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF565Q8N9K5 539 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 APCDD1LQ8NCL9 501 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR9K2Q8NGE7 335 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR10S1Q8NGN2 331 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 OR51F2Q8NH61 342 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 HAS2Q92819 552 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 NAT6Q93015 286 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 TMEM230Q96A57 120 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 MRGPRFQ96AM1 343 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF524Q96C55 264 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SMIM8Q96KF7 97 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 JSRP1Q96MG2 331 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RASL10BQ96S79 203 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 C12orf57Q99622 126 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 PIGQQ9BRB3 760 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RBM24Q9BX46 236 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SMIM3Q9BZL3 60 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 EIF5A2Q9GZV4 153 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SLC25A31Q9H0C2 315 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 WDR13Q9H1Z4 485 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SLC26A1Q9H2B4 701 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 NAA60Q9H7X0 242 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ACKR4Q9NPB9 350 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RPS10P5Q9NQ39 176 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 RCC2Q9P258 522 aaKnown RBP3.79□□□□□ -1.8
ATXN3-241ENST00000556374 SEMA5BQ9P283 1151 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 B3GAT1Q9P2W7 334 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 V9GYS6 101 aa3.79□□□□□ -1.8
ATXN3-241ENST00000556374 LRBAP50851 2863 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 BOD1L1Q8NFC6 3051 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 NSG1A0A0A6YYJ2 146 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 OR6C6A6NF89 314 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF98A6NK75 572 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 AGPAT2O15120 278 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SIGLEC5O15389 551 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ST8SIA3O43173 380 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 PHF1O43189 567 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 HSPA12AO43301 675 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 DHHO43323 396 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 XRCC2O43543 280 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SGCEO43556 437 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 LCATP04180 440 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 P04436 131 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 KLK3P07288 261 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-241ENST00000556374 FCGR3AP08637 254 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 OR8U9P0C7N5 309 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 SEC11BP0C7V7 166 aa3.78□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF44P15621 663 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms