RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ITFG2Q969R8 447 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 TMEM106AQ96A25 262 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 CEP19Q96LK0 163 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 DUX5Q96PT3 197 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 MND1Q9BWT6 205 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 CHST5Q9GZS9 411 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 PLCXD1Q9NUJ7 323 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 TAS2R4Q9NYW5 299 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 MTCH1Q9NZJ7 389 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 CNOT2Q9NZN8 540 aaKnown RBP3.83□□□□□ -1.8
ATXN3-238ENST00000556288 CTSZQ9UBR2 303 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 CKLFQ9UBR5 152 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 RAB26Q9ULW5 256 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 PCDHGB5Q9Y5G0 923 aa3.83□□□□□ -1.8
ATXN3-238ENST00000556288 SOX21Q9Y651 276 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-238ENST00000556288 MTORP42345 2549 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 IGKV1D-17A0A075B6S4 117 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 DHRS7CA6NNS2 312 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF879B4DU55 563 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 F5H0A9 414 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 RHODO00212 210 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 HSPB6O14558 160 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TCF21O43680 179 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SULT1B1O43704 296 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 CDRT1O95170 752 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 HAND1O96004 215 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 MT-ND2P03891 347 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 LIPFP07098 398 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SFTPBP07988 381 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 PGA5P0DJD9 388 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF44P15621 663 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SERPINA2P20848 420 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 CCL1P22362 96 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 BDKRB2P30411 391 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF93P35789 620 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 DLX1P56177 255 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TAS2R43P59537 309 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 PAX8Q06710 450 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 IL24Q13007 206 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 BAMBIQ13145 260 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 CDK5R1Q15078 307 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 KISS1Q15726 138 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 GRK1Q15835 563 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 DGUOKQ16854 277 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 DDI2Q5TDH0 399 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 RUSC1-AS1Q66K80 236 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 LAIR2Q6ISS4 152 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 UTS2BQ765I0 119 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SIGLECL1Q8N7X8 197 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 DNAAF1Q8NEP3 725 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 OR52N1Q8NH53 320 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 MPLKIPQ8TAP9 179 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 FAM110DQ8TAY7 271 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 UFD1Q92890 307 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF48Q96MX3 618 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 WDFY2Q96P53 400 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 OR5M11Q96RB7 305 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SLC6A7Q99884 636 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF649Q9BS31 505 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 PKIBQ9C010 78 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 PLEKHA2Q9HB19 425 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 EXOSC4Q9NPD3 245 aaKnown RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 SIRT7Q9NRC8 400 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 RBFOX1Q9NWB1 397 aaKnown RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 TMEM160Q9NX00 188 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 MSRB1Q9NZV6 116 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF69Q9UC07 566 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
ATXN3-238ENST00000556288 NUP50Q9UKX7 468 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 BLOC1S6Q9UL45 172 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 JMJD1CQ15652 2540 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
ATXN3-238ENST00000556288 NSD1Q96L73 2696 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-238ENST00000556288 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-238ENST00000556288 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms