RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 C9orf16Q9BUW7 83 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 GON7Q9BXV9 100 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 DGCR6LQ9BY27 220 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 HES4Q9HCC6 221 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 KRCC1Q9NPI7 259 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-236ENST00000556220 AKIP1Q9NQ31 210 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 RAB26Q9ULW5 256 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 LINC00312Q9Y6C7 94 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 H3BSH0 61 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 PSMD9O00233 223 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 OVOL1O14753 267 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 PRKYO43930 277 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 GADD45GO95257 159 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 TMEM11P17152 192 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 CNTFRP26992 372 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 CD34P28906 385 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 OPRL1P41146 370 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 HAAOP46952 286 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 CDK5Q00535 292 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF616Q08AN1 781 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 HLA-DRB5Q30154 266 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 ASPHD1Q5U4P2 390 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 SLX4IPQ5VYV7 408 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 OR52W1Q6IF63 320 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 MOB3CQ70IA8 216 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF573Q86YE8 665 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 OR8H2Q8N162 312 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 BATF2Q8N1L9 274 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 FAM81AQ8TBF8 368 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 CYGBQ8WWM9 190 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 DCUN1D4Q92564 292 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 ABHD6Q9BV23 337 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 NAA50Q9GZZ1 169 aaKnown RBP5.28□□□□□ -1.56
ATXN3-236ENST00000556220 SLC25A19Q9HC21 320 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 DKK2Q9UBU2 259 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 POLDIP2Q9Y2S7 368 aa5.28□□□□□ -1.56
ATXN3-236ENST00000556220 KIAA2026Q5HYC2 2103 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 LOC100130705A0A1B0GUX0 176 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 CCDC182A6NF36 153 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 I3L521 148 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 J3QT63 122 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 TOR1AO14656 332 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 IGHG4P01861 327 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 CRHBPP24387 322 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PSMB8P28062 276 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 GPR12P47775 334 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 CRISP1P54107 249 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PRRX1P54821 245 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 ERVK11-1P61568 191 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RUNX1Q01196 453 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 CFHR3Q02985 330 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RIPPLY1Q0D2K3 151 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 KIAA0141Q14154 515 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 HES1Q14469 280 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 EDDM3AQ14507 147 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 HNF4GQ14541 408 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 IRF3Q14653 427 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PTGES3Q15185 160 aaKnown RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PRAMEF5Q5TYX0 476 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 LCN1P1Q5VSP4 162 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PLCXD3Q63HM9 321 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 HEPN1Q6WQI6 88 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 DHRSXQ8N5I4 330 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RPP25LQ8N5L8 163 aaKnown RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 TPRX1Q8N7U7 411 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 ZNF485Q8NCK3 441 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RHOXF1Q8NHV9 184 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 TRMT10AQ8TBZ6 339 aaKnown RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 ITFG2Q969R8 447 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RPEQ96AT9 228 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 UBE2E2Q96LR5 201 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 GHITMQ9H3K2 345 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 RIBC2Q9H4K1 309 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 NIPAL2Q9H841 368 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 REEP1Q9H902 201 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 MED20Q9H944 212 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 PCDHB16Q9NRJ7 776 aa5.27□□□□□ -1.57
ATXN3-236ENST00000556220 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 FAM32AQ9Y421 112 aaKnown RBP5.27□□□□□ -1.57
ATXN3-236ENST00000556220 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 B5MCH6 92 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 J3QRE1 110 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 CCNB2O95067 398 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 NRASP01111 189 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 MT-ND2P03891 347 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 H2BFMP0C1H6 154 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 CLEC2LP0C7M8 214 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 CLUP10909 449 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ATP6V1B1P15313 513 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 SLC2A5P22732 501 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 CDK2P24941 298 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 MPZP25189 248 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 ERP29P30040 261 aaKnown RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 KIR3DL2P43630 455 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 MAP2K4P45985 399 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 BLVRAP53004 296 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 NHLH2Q02577 135 aa5.26□□□□□ -1.57
ATXN3-236ENST00000556220 RBM39Q14498 530 aaKnown RBP5.26□□□□□ -1.57
ATXN3-236ENST00000556220 GRK1Q15835 563 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms