RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MGAT4AQ9UM21 535 aa6.31□□□□□ -1.4
TDP1-214ENST00000556063 UBE2J1Q9Y385 318 aaPredicted RBP6.31□□□□□ -1.4
TDP1-214ENST00000556063 KPTNQ9Y664 436 aa6.31□□□□□ -1.4
TDP1-214ENST00000556063 AUP1Q9Y679 476 aa6.31□□□□□ -1.4
TDP1-214ENST00000556063 LINC00312Q9Y6C7 94 aa6.31□□□□□ -1.4
TDP1-214ENST00000556063 MTORP42345 2549 aa6.31□□□□□ -1.4
TDP1-214ENST00000556063 MAP1AP78559 2803 aaPredicted RBP6.31□□□□□ -1.4
TDP1-214ENST00000556063 A0A075B6Q4 140 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 NBPF19A0A087WUL8 3843 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ZNF729A6NN14 1252 aaPredicted RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 FAM25AB3EWG3 89 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 FAM25CB3EWG5 89 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 FAM25GB3EWG6 89 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 RGS5O15539 181 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 CLPXO76031 633 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 TOX4O94842 621 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 RBP4P02753 201 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 MT-ND4P03905 459 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 GSTP1P09211 210 aaKnown RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 ZNF728P0DKX0 622 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 HIST1H1DP16402 221 aaKnown RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 MNDAP41218 407 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 GLIPR1P48060 266 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 EFNB2P52799 333 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ARF6P62330 175 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 PITPNAQ00169 270 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 PAX2Q02962 417 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 SCGB2A2Q13296 93 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 PNLIPRP3Q17RR3 467 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 RSBN1Q5VWQ0 802 aaPredicted RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 NCR3LG1Q68D85 454 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 BRICD5Q6PL45 260 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ZNF497Q6ZNH5 498 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 MOB1BQ7L9L4 216 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ZNF554Q86TJ5 538 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 FGFRL1Q8N441 504 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 TPRX1Q8N7U7 411 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 MCFD2Q8NI22 146 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 C15orf40Q8WUR7 153 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 CORO2AQ92828 525 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 COQ2Q96H96 371 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 ZNF714Q96N38 554 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 WDFY2Q96P53 400 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 CMSS1Q9BQ75 279 aaKnown RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 SULT4A1Q9BR01 284 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 FAAP24Q9BTP7 215 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 PECRQ9BY49 303 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 METTL8Q9H825 291 aaKnown RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 CHMP1AQ9HD42 196 aaPredicted RBP6.3□□□□□ -1.4
TDP1-214ENST00000556063 C12orf4Q9NQ89 552 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.3□□□□□ -1.4
TDP1-214ENST00000556063 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 A3GALT2U3KPV4 340 aa6.3□□□□□ -1.4
TDP1-214ENST00000556063 TRAV18A0A075B6X5 111 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 FOXI3A8MTJ6 420 aaPredicted RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 MFNGO00587 321 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 SPINT2O43291 252 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 XRCC3O43542 346 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 ORC5O43913 435 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 FCN3O75636 299 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 TPPPO94811 219 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 PRTN3P24158 256 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 S100A5P33763 92 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 SRP14P37108 136 aaKnown RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 GLP1RP43220 463 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 TMEM50BP56557 158 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 GNG2P59768 71 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 ERVFRD-1P60508 538 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 GUCA2AQ02747 115 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 PLA2G7Q13093 441 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 CR1LQ2VPA4 569 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 TMEM30BQ3MIR4 351 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 CDNFQ49AH0 187 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 TMEM69Q5SWH9 247 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 OR52W1Q6IF63 320 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 METAP1DQ6UB28 335 aaPredicted RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 GAPTQ8N292 157 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 NANPQ8TBE9 248 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 PLPPR1Q8TBJ4 325 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 MRGPRDQ8TDS7 321 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 DACT3Q96B18 629 aaPredicted RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 SLC25A38Q96DW6 304 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 SMR3AQ99954 134 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 PCGF1Q9BSM1 259 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 DCUN1D5Q9BTE7 237 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 C6orf62Q9GZU0 229 aaPredicted RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 MMP27Q9H306 513 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 HEXA-AS1Q9H8Q6 139 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 ZNF581Q9P0T4 197 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 RABL2AQ9UBK7 228 aaPredicted RBP6.29□□□□□ -1.4
TDP1-214ENST00000556063 OPN4Q9UHM6 478 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 AK3Q9UIJ7 227 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 RABL2BQ9UNT1 228 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
TDP1-214ENST00000556063 TRBV6-6A0A0A6YYG2 114 aa6.28□□□□□ -1.4
TDP1-214ENST00000556063 KBTBD11-OT1A0A1B0GTJ5 212 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms