RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 MAGEA6P43360 314 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 AQP5P55064 265 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 OR2B6P58173 313 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 C1QTNF8P60827 252 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 MMDQ15546 238 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 WDR59Q6PJI9 974 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 MARCH3Q86UD3 253 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 C10orf107Q8IVU9 208 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 ZNF738Q8NE65 137 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 MAL2Q969L2 176 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 CLDN23Q96B33 292 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 TAPBPLQ9BX59 468 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 EBPLQ9BY08 206 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 GABARAPL1Q9H0R8 117 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 ENPP5Q9UJA9 477 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 MCTS1Q9ULC4 181 aaKnown RBP1.38□□□□□ -2.19
SCFD1-217ENST00000555953 POMPQ9Y244 141 aa1.38□□□□□ -2.19
SCFD1-217ENST00000555953 ZNF443Q9Y2A4 671 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-217ENST00000555953 TMEM94Q12767 1356 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 IGHV1-45A0A0A0MS14 117 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 A0A1B0GTI1 187 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 ERICH2A1L162 156 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 M0QX08 132 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SULT1C2O00338 296 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SLC31A1O15431 190 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PSCAO43653 123 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 NDUFS6O75380 124 aaKnown RBP1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SOX14O95416 240 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 GPR75O95800 540 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 NPPAP01160 153 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 GABRA1P14867 456 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SPNP16150 400 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 ZNF3P17036 446 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PYCR1P32322 319 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 OR10A3P58181 314 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 RAB31Q13636 194 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SLC9A3R2Q15599 337 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 ZNF141Q15928 474 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 TMEM249Q2WGJ8 235 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PYDC2Q56P42 97 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 CYHR1Q6ZMK1 362 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 DGAT2L6Q6ZPD8 337 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SSX7Q7RTT5 188 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 OLIG3Q7RTU3 272 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 LYZL2Q7Z4W2 148 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 SYCE1Q8N0S2 351 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 EIF4E3Q8N5X7 224 aaKnown RBP1.37□□□□□ -2.19
SCFD1-217ENST00000555953 FER1L6-AS1Q8NA97 138 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 GTF2H4Q92759 462 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PPWD1Q96BP3 646 aaKnown RBP1.37□□□□□ -2.19
SCFD1-217ENST00000555953 OTUB2Q96DC9 234 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 MRAP2Q96G30 205 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PGLYRP3Q96LB9 341 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 TRIB3Q96RU7 358 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 PKMYT1Q99640 499 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 FAAP24Q9BTP7 215 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 TAS2R13Q9NYV9 303 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 NAGKQ9UJ70 344 aa1.37□□□□□ -2.19
SCFD1-217ENST00000555953 EIF4G1Q04637 1599 aaKnown RBP1.37□□□□□ -2.19
SCFD1-217ENST00000555953 LRPPRCP42704 1394 aaKnown RBP1.36□□□□□ -2.19
SCFD1-217ENST00000555953 ATAD5Q96QE3 1844 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 TRBV24-1A0A075B6N3 115 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 A0A0B4J2C4 111 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 OR5H14A6NHG9 310 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 H3BMM0 161 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 PHYHO14832 338 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 FGF16O43320 207 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 UGT2B11O75310 529 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 TNFAIP8O95379 198 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 OPN1SWP03999 348 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 GYPCP04921 128 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 GP1BAP07359 652 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 PSKH1P11801 424 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 AKR1C4P17516 323 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 LGALS3P17931 250 aaKnown RBP1.36□□□□□ -2.19
SCFD1-217ENST00000555953 CRABP2P29373 138 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 TGFBR2P37173 567 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 HSPA13P48723 471 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 INPP1P49441 399 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 DMTNQ08495 405 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 DHRS2Q13268 280 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 SLAMF1Q13291 335 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 XRCC4Q13426 336 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 PAFAH1B3Q15102 231 aaKnown RBP1.36□□□□□ -2.19
SCFD1-217ENST00000555953 ANGPT1Q15389 498 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 BCL2A1Q16548 175 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 PYCR3Q53H96 274 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 OR10J3Q5JRS4 329 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 HCP5Q6MZN7 132 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 TCF24Q7RTU0 167 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 MUC15Q8N387 334 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 OTUD6BQ8N6M0 293 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 UBE2WQ96B02 151 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 DDIT4LQ96D03 193 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 CMBLQ96DG6 245 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 B9D2Q9BPU9 175 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 ACBD6Q9BR61 282 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 BBS2Q9BXC9 721 aa1.36□□□□□ -2.19
SCFD1-217ENST00000555953 OR2D2Q9H210 308 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms