RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FAM185AQ8N0U4 392 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 OR4S1Q8NGB4 309 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 COX4I2Q96KJ9 171 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 THAP7Q9BT49 309 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-220ENST00000555634 ABCA12Q86UK0 2595 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 TMEM82A0PJX8 343 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 MEIS3P1A6NDR6 274 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 ENSAO43768 121 aaKnown RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 FOXH1O75593 365 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 HLA-DQB1P01920 261 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 USF1P22415 310 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 IL2RGP31785 369 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 TMEM50BP56557 158 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 HLA-DRB3P79483 266 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 DGCR2P98153 550 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 HOXA4Q00056 320 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 AESQ08117 197 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 DCTN2Q13561 401 aaKnown RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 MEF2DQ14814 521 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 SRSF7Q16629 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 RNASE10Q5GAN6 216 aaKnown RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 RSBN1Q5VWQ0 802 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 MZT2BQ6NZ67 158 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 BTNL3Q6UXE8 466 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 BIVMQ86UB2 503 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 TMEM17Q86X19 198 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 BEST4Q8NFU0 473 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 OR5H2Q8NGV7 314 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 OR4K15Q8NH41 348 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 OR52I2Q8NH67 350 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 DYRK2Q92630 601 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 GCDHQ92947 438 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 ABHD1Q96SE0 405 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 FOXC2Q99958 501 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 ST6GALNAC5Q9BVH7 336 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 NCOR1P1Q9H4R4 102 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 ABCB10Q9NRK6 738 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 NECAP2Q9NVZ3 263 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 MTFP1Q9UDX5 166 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 KIF25Q9UIL4 384 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 UBE2J1Q9Y385 318 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-220ENST00000555634 MAB21L2Q9Y586 359 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 LINC00312Q9Y6C7 94 aa9.32□□□□□ -0.92
SHMT2-220ENST00000555634 CELSR2Q9HCU4 2923 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 TRBV6-6A0A0A6YYG2 114 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF729A6NN14 1252 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-220ENST00000555634 HSPA12AO43301 675 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 UPK1BO75841 260 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 NAPSAO96009 420 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 IGHV2-5P01817 119 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 CTXN2P0C2S0 81 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 AKAIN1P0CW23 69 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 IL7P13232 177 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 GUCA2AQ02747 115 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 OLFML2AQ68BL7 652 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 OR4A4PQ8NGN8 299 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 MRPL30Q8TCC3 161 aaKnown RBP9.31□□□□□ -0.92
SHMT2-220ENST00000555634 CCDC107Q8WV48 283 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF714Q96N38 554 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 SOSTQ9BQB4 213 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
SHMT2-220ENST00000555634 GINS4Q9BRT9 223 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 CTSZQ9UBR2 303 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 METRNQ9UJH8 293 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 KCNK7Q9Y2U2 307 aa9.31□□□□□ -0.92
SHMT2-220ENST00000555634 YLPM1P49750 1951 aaKnown RBP9.31□□□□□ -0.92
SHMT2-220ENST00000555634 TACC2O95359 2948 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 LOC105371242A0A075B767 164 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 IGHV4-30-2A0A087WSY4 118 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 MEIOCA2RUB1 952 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 NAP1L6A6NFF2 107 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 TRDCB7Z8K6 153 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 DISC1C4P0D8 188 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 F5H0A9 414 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-220ENST00000555634 J3QRK9 145 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 RGS11O94810 467 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 DIRAS3O95661 229 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 TFF1P04155 84 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 LIPFP07098 398 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 WNT2P09544 360 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 SELLP14151 372 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 GZMHP20718 246 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 GLIPR1P48060 266 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 TSPAN5P62079 268 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 WDR25Q64LD2 544 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-220ENST00000555634 STEAP3Q658P3 488 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 LYPD2Q6UXB3 125 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 Q6ZS49 121 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 BTN2A1Q7KYR7 527 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 HOGA1Q86XE5 327 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 TMEM229BQ8NBD8 167 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 MRGPRDQ8TDS7 321 aa9.3□□□□□ -0.92
SHMT2-220ENST00000555634 IL1F10Q8WWZ1 152 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms