RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KCNS2Q9ULS6 477 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 UBE2J1Q9Y385 318 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 HIVEP1P15822 2718 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 TRBV6-6A0A0A6YYG2 114 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 TMEM30CPA0ZSE6 113 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 UBE2QL1A1L167 161 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 SERPINE3A8MV23 424 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 C17orf98A8MV24 154 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 A8MV72 311 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-219ENST00000555323 MFNGO00587 321 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 XRCC3O43542 346 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 NAPSAO96009 420 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 MMP9P14780 707 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 HIST1H1DP16402 221 aaKnown RBP10.43□□□□□ -0.74
SYNE2-219ENST00000555323 GZMHP20718 246 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF273Q14593 569 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 NKAPLQ5M9Q1 402 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 FAHD2BQ6P2I3 314 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-219ENST00000555323 Q8N7P7 452 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 SAMD12Q8N8I0 201 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 DYRK2Q92630 601 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 FAHD2AQ96GK7 314 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 CYYR1Q96J86 154 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 WDFY2Q96P53 400 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 GSX1Q9H4S2 264 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-219ENST00000555323 C7orf69Q9H7B7 122 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 DIABLOQ9NR28 239 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 MBNL3Q9NUK0 354 aaKnown RBP10.43□□□□□ -0.74
SYNE2-219ENST00000555323 ETAA1Q9NY74 926 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 OPN4Q9UHM6 478 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 KIF25Q9UIL4 384 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 A3GALT2U3KPV4 340 aa10.43□□□□□ -0.74
SYNE2-219ENST00000555323 MEIKINA0A087WXM9 373 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 A0A1W2PQ09 198 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 AVPP01185 164 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 RBP4P02753 201 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 MELTFP08582 738 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 GSTP1P09211 210 aaKnown RBP10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF728P0DKX0 622 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ARF6P62330 175 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF260Q3ZCT1 412 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF880Q6PDB4 577 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF554Q86TJ5 538 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 RTN4RL2Q86UN3 420 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 FAM185AQ8N0U4 392 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 NEK7Q8TDX7 302 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 PHF21AQ96BD5 680 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 UPRTQ96BW1 309 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF714Q96N38 554 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 AK3Q9UIJ7 227 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 AUP1Q9Y679 476 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 MAST4O15021 2626 aa10.42□□□□□ -0.74
SYNE2-219ENST00000555323 KBTBD11-OT1A0A1B0GTJ5 212 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 hCG_1809904A0A1W2PP81 198 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 A0A1W2PPE2 198 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 A0A1W2PR64 198 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 A0A1W2PRV1 198 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF729A6NN14 1252 aaPredicted RBP10.41□□□□□ -0.74
SYNE2-219ENST00000555323 NPIPB11E5RHQ5 1161 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 CTDSP2O14595 271 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 ORC5O43913 435 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 HPGDSO60760 199 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 TPPPO94811 219 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 EIF4EP06730 217 aaKnown RBP10.41□□□□□ -0.74
SYNE2-219ENST00000555323 GNB3P16520 340 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 CCL3L1P16619 93 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 ELK1P19419 428 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 PRTN3P24158 256 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 CDK2P24941 298 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 PNLIPRP3Q17RR3 467 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 C17orf58Q2M2W7 97 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 CDNFQ49AH0 187 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 METTL11BQ5VVY1 283 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 HACD4Q5VWC8 232 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 OR13A1Q8NGR1 328 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 MRPL30Q8TCC3 161 aaKnown RBP10.41□□□□□ -0.74
SYNE2-219ENST00000555323 TNFRSF14Q92956 283 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 TBX15Q96SF7 602 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 MMP27Q9H306 513 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 METTL8Q9H825 291 aaKnown RBP10.41□□□□□ -0.74
SYNE2-219ENST00000555323 ING3Q9NXR8 418 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 F8P00451 2351 aa10.41□□□□□ -0.74
SYNE2-219ENST00000555323 ZANQ9Y493 2812 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 C15orf65H3BRN8 121 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 TOX4O94842 621 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 PITPNAQ00169 270 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 SRSF7Q16629 238 aaKnown RBP eCLIP10.4□□□□□ -0.74
SYNE2-219ENST00000555323 OLFML2AQ68BL7 652 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 HEPN1Q6WQI6 88 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 Q6ZPA2 131 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 OR10A7Q8NGE5 316 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 OR4K15Q8NH41 348 aa10.4□□□□□ -0.74
SYNE2-219ENST00000555323 CMSS1Q9BQ75 279 aaKnown RBP10.4□□□□□ -0.74
SYNE2-219ENST00000555323 DCUN1D5Q9BTE7 237 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms