RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
CHD8-208ENST00000555301 A0A075B6Q4 140 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 A6NHS1 94 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 MFNGO00587 321 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 MT-ND4P03905 459 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 ARF6P62330 175 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 MRPS15P82914 257 aaKnown RBP11.76□□□□□ -0.53
CHD8-208ENST00000555301 ZNF273Q14593 569 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 WDFY2Q96P53 400 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 DCUN1D5Q9BTE7 237 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 SLIRPQ9GZT3 109 aaKnown RBP11.76□□□□□ -0.53
CHD8-208ENST00000555301 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 MAST4O15021 2626 aa11.76□□□□□ -0.53
CHD8-208ENST00000555301 POM121CA8CG34 1229 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 XRCC3O43542 346 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 HPGDSO60760 199 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 TOX4O94842 621 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 RBP4P02753 201 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 GSTP1P09211 210 aaKnown RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 GNB3P16520 340 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 GZMHP20718 246 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 GLP1RP43220 463 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 CDNFQ49AH0 187 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 TRAT1Q6PIZ9 186 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 DYRK2Q92630 601 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 METTL8Q9H825 291 aaKnown RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 C12orf4Q9NQ89 552 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD8-208ENST00000555301 OPN4Q9UHM6 478 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 AK3Q9UIJ7 227 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 TRAPPC2LQ9UL33 140 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 KCNK7Q9Y2U2 307 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
CHD8-208ENST00000555301 CR1P17927 2039 aa11.75□□□□□ -0.53
CHD8-208ENST00000555301 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 TRAV18A0A075B6X5 111 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 TRBV6-6A0A0A6YYG2 114 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 ZNF729A6NN14 1252 aaPredicted RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 RGS5O15539 181 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 NAPSAO96009 420 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 EIF4EP06730 217 aaKnown RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 CD3GP09693 182 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 MMP9P14780 707 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 CCL3L1P16619 93 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 HNF1AP20823 631 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 CDK2P24941 298 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 TMEM69Q5SWH9 247 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 C6orf183Q5T699 404 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 OR4K15Q8NH41 348 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 MCFD2Q8NI22 146 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 MRPL30Q8TCC3 161 aaKnown RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 CCDC107Q8WV48 283 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 PCGF1Q9BSM1 259 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 NXF2Q9GZY0 626 aaKnown RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 UNKLQ9H9P5 680 aaKnown RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 ZMAT3Q9HA38 289 aaKnown RBP11.74□□□□□ -0.53
CHD8-208ENST00000555301 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 A3GALT2U3KPV4 340 aa11.74□□□□□ -0.53
CHD8-208ENST00000555301 KBTBD11-OT1A0A1B0GTJ5 212 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MEX3AA1L020 520 aaKnown RBP11.73□□□□□ -0.53
CHD8-208ENST00000555301 FAM25AB3EWG3 89 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 FAM25CB3EWG5 89 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 FAM25GB3EWG6 89 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 ELK1P19419 428 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 PRTN3P24158 256 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 TALDO1P37837 337 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MNDAP41218 407 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 DLX6P56179 175 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 ERVFRD-1P60508 538 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 PITPNAQ00169 270 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 ARFRP1Q13795 201 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 PNLIPRP3Q17RR3 467 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 HACD4Q5VWC8 232 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 OLFML2AQ68BL7 652 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MOB1BQ7L9L4 216 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 RTN4RL2Q86UN3 420 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 Q8N7P7 452 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 UPRTQ96BW1 309 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 C6orf62Q9GZU0 229 aaPredicted RBP11.73□□□□□ -0.53
CHD8-208ENST00000555301 MMP27Q9H306 513 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
CHD8-208ENST00000555301 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 KCNIP1Q9NZI2 227 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 MGAT4AQ9UM21 535 aa11.73□□□□□ -0.53
CHD8-208ENST00000555301 CELSR1Q9NYQ6 3014 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms